Gene : HanXRQChr15g0496661 H. annuus r1.2
Defline:  (1 of 2) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  3077
Name:  ? HanXRQChr15g0496661 Secondary Identifier:  ? PAC:40335525
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus ARO-PWY Helianthus annuus pathologic  
Hannuus PWY-6163 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr15g0496661 0.5kb upstream 0.5kb upstream 6867   true HanXRQChr15: 169278835-169285701 Helianthus annuus
HanXRQChr15g0496661 0.5kb upstream 0.5kb upstream 500   false HanXRQChr15: 169285202-169285701 Helianthus annuus
HanXRQChr15g0496661 0.5kb downstream 0.5kb downstream 6867   true HanXRQChr15: 169278335-169285201 Helianthus annuus
HanXRQChr15g0496661 0.5kb downstream 0.5kb downstream 500   false HanXRQChr15: 169278335-169278834 Helianthus annuus
HanXRQChr15g0496661 1.0kb upstream 1.0kb upstream 7367   true HanXRQChr15: 169278835-169286201 Helianthus annuus
HanXRQChr15g0496661 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr15: 169285202-169286201 Helianthus annuus
HanXRQChr15g0496661 1.0kb downstream 1.0kb downstream 7367   true HanXRQChr15: 169277835-169285201 Helianthus annuus
HanXRQChr15g0496661 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr15: 169277835-169278834 Helianthus annuus
HanXRQChr15g0496661 2.0kb upstream 2.0kb upstream 8367   true HanXRQChr15: 169278835-169287201 Helianthus annuus
HanXRQChr15g0496661 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr15: 169285202-169287201 Helianthus annuus
HanXRQChr15g0496661 2.0kb downstream 2.0kb downstream 8367   true HanXRQChr15: 169276835-169285201 Helianthus annuus
HanXRQChr15g0496661 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr15: 169276835-169278834 Helianthus annuus
HanXRQChr15g0496661 5.0kb upstream 5.0kb upstream 11367   true HanXRQChr15: 169278835-169290201 Helianthus annuus
HanXRQChr15g0496661 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr15: 169285202-169290201 Helianthus annuus
HanXRQChr15g0496661 5.0kb downstream 5.0kb downstream 11367   true HanXRQChr15: 169273835-169285201 Helianthus annuus
HanXRQChr15g0496661 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr15: 169273835-169278834 Helianthus annuus
HanXRQChr15g0496661 10.0kb upstream 10.0kb upstream 16367   true HanXRQChr15: 169278835-169295201 Helianthus annuus
HanXRQChr15g0496661 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr15: 169285202-169295201 Helianthus annuus
HanXRQChr15g0496661 10.0kb downstream 10.0kb downstream 16367   true HanXRQChr15: 169268835-169285201 Helianthus annuus
HanXRQChr15g0496661 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr15: 169268835-169278834 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041230 5273 Angiosperm View MSA
121475798 5263 Asterids View MSA
123747909 5271 Pentapetalae View MSA
122787011 5272 Eudicot View MSA
121346403 5274 Embryophyte View MSA
123428194 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain