Gene : HanXRQChr15g0493311 H. annuus r1.2
Defline:  (1 of 4) KOG3057 - Cytochrome c oxidase, subunit VIb/COX12 Genomic Order:  2773
Name:  ? HanXRQChr15g0493311 Secondary Identifier:  ? PAC:40335415
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus PWY-3781 Helianthus annuus pathologic  
Hannuus PWY-7279 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr15g0493311 0.5kb upstream 0.5kb upstream 6477   true HanXRQChr15: 144435642-144442118 Helianthus annuus
HanXRQChr15g0493311 0.5kb upstream 0.5kb upstream 500   false HanXRQChr15: 144435642-144436141 Helianthus annuus
HanXRQChr15g0493311 0.5kb downstream 0.5kb downstream 6477   true HanXRQChr15: 144436142-144442618 Helianthus annuus
HanXRQChr15g0493311 0.5kb downstream 0.5kb downstream 500   false HanXRQChr15: 144442119-144442618 Helianthus annuus
HanXRQChr15g0493311 1.0kb upstream 1.0kb upstream 6977   true HanXRQChr15: 144435142-144442118 Helianthus annuus
HanXRQChr15g0493311 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr15: 144435142-144436141 Helianthus annuus
HanXRQChr15g0493311 1.0kb downstream 1.0kb downstream 6977   true HanXRQChr15: 144436142-144443118 Helianthus annuus
HanXRQChr15g0493311 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr15: 144442119-144443118 Helianthus annuus
HanXRQChr15g0493311 2.0kb upstream 2.0kb upstream 7977   true HanXRQChr15: 144434142-144442118 Helianthus annuus
HanXRQChr15g0493311 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr15: 144434142-144436141 Helianthus annuus
HanXRQChr15g0493311 2.0kb downstream 2.0kb downstream 7977   true HanXRQChr15: 144436142-144444118 Helianthus annuus
HanXRQChr15g0493311 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr15: 144442119-144444118 Helianthus annuus
HanXRQChr15g0493311 5.0kb upstream 5.0kb upstream 10977   true HanXRQChr15: 144431142-144442118 Helianthus annuus
HanXRQChr15g0493311 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr15: 144431142-144436141 Helianthus annuus
HanXRQChr15g0493311 5.0kb downstream 5.0kb downstream 10977   true HanXRQChr15: 144436142-144447118 Helianthus annuus
HanXRQChr15g0493311 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr15: 144442119-144447118 Helianthus annuus
HanXRQChr15g0493311 10.0kb upstream 10.0kb upstream 15977   true HanXRQChr15: 144426142-144442118 Helianthus annuus
HanXRQChr15g0493311 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr15: 144426142-144436141 Helianthus annuus
HanXRQChr15g0493311 10.0kb downstream 10.0kb downstream 15977   true HanXRQChr15: 144436142-144452118 Helianthus annuus
HanXRQChr15g0493311 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr15: 144442119-144452118 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475480 5263 Asterids View MSA
123743678 5271 Pentapetalae View MSA
122770737 5272 Eudicot View MSA
122050829 5273 Angiosperm View MSA
121351047 5274 Embryophyte View MSA
123424784 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain