Gene : HanXRQChr17g0540201 H. annuus r1.2
Defline:  (1 of 11) K00134 - glyceraldehyde 3-phosphate dehydrogenase (GAPDH, gapA) Genomic Order:  665
Name:  ? HanXRQChr17g0540201 Secondary Identifier:  ? PAC:40329221
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus ANAEROFRUCAT-PWY Helianthus annuus pathologic  
Hannuus ANAGLYCOLYSIS-PWY Helianthus annuus pathologic  
Hannuus GLUCONEO-PWY Helianthus annuus pathologic  
Hannuus PWY-1042 Helianthus annuus pathologic  
Hannuus PWY-5464 Helianthus annuus pathologic  
Hannuus PWY66-399 Helianthus annuus pathologic  
Hannuus SUCSYN-PWY Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr17g0540201 0.5kb upstream 0.5kb upstream 4233   true HanXRQChr17: 22702336-22706568 Helianthus annuus
HanXRQChr17g0540201 0.5kb upstream 0.5kb upstream 500   false HanXRQChr17: 22706069-22706568 Helianthus annuus
HanXRQChr17g0540201 0.5kb downstream 0.5kb downstream 4233   true HanXRQChr17: 22701836-22706068 Helianthus annuus
HanXRQChr17g0540201 0.5kb downstream 0.5kb downstream 500   false HanXRQChr17: 22701836-22702335 Helianthus annuus
HanXRQChr17g0540201 1.0kb upstream 1.0kb upstream 4733   true HanXRQChr17: 22702336-22707068 Helianthus annuus
HanXRQChr17g0540201 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr17: 22706069-22707068 Helianthus annuus
HanXRQChr17g0540201 1.0kb downstream 1.0kb downstream 4733   true HanXRQChr17: 22701336-22706068 Helianthus annuus
HanXRQChr17g0540201 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr17: 22701336-22702335 Helianthus annuus
HanXRQChr17g0540201 2.0kb upstream 2.0kb upstream 5733   true HanXRQChr17: 22702336-22708068 Helianthus annuus
HanXRQChr17g0540201 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr17: 22706069-22708068 Helianthus annuus
HanXRQChr17g0540201 2.0kb downstream 2.0kb downstream 5733   true HanXRQChr17: 22700336-22706068 Helianthus annuus
HanXRQChr17g0540201 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr17: 22700336-22702335 Helianthus annuus
HanXRQChr17g0540201 5.0kb upstream 5.0kb upstream 8733   true HanXRQChr17: 22702336-22711068 Helianthus annuus
HanXRQChr17g0540201 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr17: 22706069-22711068 Helianthus annuus
HanXRQChr17g0540201 5.0kb downstream 5.0kb downstream 8733   true HanXRQChr17: 22697336-22706068 Helianthus annuus
HanXRQChr17g0540201 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr17: 22697336-22702335 Helianthus annuus
HanXRQChr17g0540201 10.0kb upstream 10.0kb upstream 13733   true HanXRQChr17: 22702336-22716068 Helianthus annuus
HanXRQChr17g0540201 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr17: 22706069-22716068 Helianthus annuus
HanXRQChr17g0540201 10.0kb downstream 10.0kb downstream 13733   true HanXRQChr17: 22692336-22706068 Helianthus annuus
HanXRQChr17g0540201 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr17: 22692336-22702335 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467554 5263 Asterids View MSA
123750297 5271 Pentapetalae View MSA
122795499 5272 Eudicot View MSA
122051601 5273 Angiosperm View MSA
121347451 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain