Gene : Pahal.5G438400 P. hallii v3.1
Defline:  (1 of 1) PTHR31956//PTHR31956:SF2 - FAMILY NOT NAMED // NON-SPECIFIC PHOSPHOLIPASE C6 Genomic Order:  3766
Name:  ? Pahal.5G438400 Secondary Identifier:  ? PAC:40363743
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii LIPASYN-PWY Panicum hallii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.5G438400 0.5kb upstream 0.5kb upstream 3042 true Chr05: 52790604-52793645 Panicum hallii
Pahal.5G438400 0.5kb upstream 0.5kb upstream 500 false Chr05: 52793146-52793645 Panicum hallii
Pahal.5G438400 0.5kb downstream 0.5kb downstream 3042 true Chr05: 52790104-52793145 Panicum hallii
Pahal.5G438400 0.5kb downstream 0.5kb downstream 500 false Chr05: 52790104-52790603 Panicum hallii
Pahal.5G438400 1.0kb upstream 1.0kb upstream 3542 true Chr05: 52790604-52794145 Panicum hallii
Pahal.5G438400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 52793146-52794145 Panicum hallii
Pahal.5G438400 1.0kb downstream 1.0kb downstream 3542 true Chr05: 52789604-52793145 Panicum hallii
Pahal.5G438400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 52789604-52790603 Panicum hallii
Pahal.5G438400 2.0kb upstream 2.0kb upstream 4542 true Chr05: 52790604-52795145 Panicum hallii
Pahal.5G438400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 52793146-52795145 Panicum hallii
Pahal.5G438400 2.0kb downstream 2.0kb downstream 4542 true Chr05: 52788604-52793145 Panicum hallii
Pahal.5G438400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 52788604-52790603 Panicum hallii
Pahal.5G438400 5.0kb upstream 5.0kb upstream 7542 true Chr05: 52790604-52798145 Panicum hallii
Pahal.5G438400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 52793146-52798145 Panicum hallii
Pahal.5G438400 5.0kb downstream 5.0kb downstream 7542 true Chr05: 52785604-52793145 Panicum hallii
Pahal.5G438400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 52785604-52790603 Panicum hallii
Pahal.5G438400 10.0kb upstream 10.0kb upstream 12542 true Chr05: 52790604-52803145 Panicum hallii
Pahal.5G438400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 52793146-52803145 Panicum hallii
Pahal.5G438400 10.0kb downstream 10.0kb downstream 12542 true Chr05: 52780604-52793145 Panicum hallii
Pahal.5G438400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 52780604-52790603 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184636 5267 Panicoideae View MSA
124577445 5269 Grass View MSA
122046381 5273 Angiosperm View MSA
121310596 5274 Embryophyte View MSA
123348041 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain