Gene : Pahal.4G265400 P. hallii v3.1
Defline:  (1 of 3) K00703 - starch synthase (E2.4.1.21, glgA) Genomic Order:  1998
Name:  ? Pahal.4G265400 Secondary Identifier:  ? PAC:40369457
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii GLYCOGENSYNTH-PWY Panicum hallii pathologic  
Phallii PWY-622 Panicum hallii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.4G265400 0.5kb upstream 0.5kb upstream 5066 true Chr04: 46170196-46175261 Panicum hallii
Pahal.4G265400 0.5kb upstream 0.5kb upstream 500 false Chr04: 46170196-46170695 Panicum hallii
Pahal.4G265400 0.5kb downstream 0.5kb downstream 5066 true Chr04: 46170696-46175761 Panicum hallii
Pahal.4G265400 0.5kb downstream 0.5kb downstream 500 false Chr04: 46175262-46175761 Panicum hallii
Pahal.4G265400 1.0kb upstream 1.0kb upstream 5566 true Chr04: 46169696-46175261 Panicum hallii
Pahal.4G265400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46169696-46170695 Panicum hallii
Pahal.4G265400 1.0kb downstream 1.0kb downstream 5566 true Chr04: 46170696-46176261 Panicum hallii
Pahal.4G265400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46175262-46176261 Panicum hallii
Pahal.4G265400 2.0kb upstream 2.0kb upstream 6566 true Chr04: 46168696-46175261 Panicum hallii
Pahal.4G265400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46168696-46170695 Panicum hallii
Pahal.4G265400 2.0kb downstream 2.0kb downstream 6566 true Chr04: 46170696-46177261 Panicum hallii
Pahal.4G265400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46175262-46177261 Panicum hallii
Pahal.4G265400 5.0kb upstream 5.0kb upstream 9566 true Chr04: 46165696-46175261 Panicum hallii
Pahal.4G265400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46165696-46170695 Panicum hallii
Pahal.4G265400 5.0kb downstream 5.0kb downstream 9566 true Chr04: 46170696-46180261 Panicum hallii
Pahal.4G265400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46175262-46180261 Panicum hallii
Pahal.4G265400 10.0kb upstream 10.0kb upstream 14566 true Chr04: 46160696-46175261 Panicum hallii
Pahal.4G265400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46160696-46170695 Panicum hallii
Pahal.4G265400 10.0kb downstream 10.0kb downstream 14566 true Chr04: 46170696-46185261 Panicum hallii
Pahal.4G265400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46175262-46185261 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178854 5267 Panicoideae View MSA
124577600 5269 Grass View MSA
122042262 5273 Angiosperm View MSA
121347324 5274 Embryophyte View MSA
123426751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain