Gene : Pahal.4G115700 P. hallii v3.1

Defline:  (1 of 11) 1.3.3.8 - Tetrahydroberberine oxidase / THB oxidase Genomic Order:  1108
Name:  ? Pahal.4G115700 Secondary Identifier:  ? PAC:40372027

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.4G115700 0.5kb upstream 0.5kb upstream 2323 true Chr04: 8929722-8932044 Panicum hallii
Pahal.4G115700 0.5kb upstream 0.5kb upstream 500 false Chr04: 8929722-8930221 Panicum hallii
Pahal.4G115700 0.5kb downstream 0.5kb downstream 2323 true Chr04: 8930222-8932544 Panicum hallii
Pahal.4G115700 0.5kb downstream 0.5kb downstream 500 false Chr04: 8932045-8932544 Panicum hallii
Pahal.4G115700 1.0kb upstream 1.0kb upstream 2823 true Chr04: 8929222-8932044 Panicum hallii
Pahal.4G115700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 8929222-8930221 Panicum hallii
Pahal.4G115700 1.0kb downstream 1.0kb downstream 2823 true Chr04: 8930222-8933044 Panicum hallii
Pahal.4G115700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 8932045-8933044 Panicum hallii
Pahal.4G115700 2.0kb upstream 2.0kb upstream 3823 true Chr04: 8928222-8932044 Panicum hallii
Pahal.4G115700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 8928222-8930221 Panicum hallii
Pahal.4G115700 2.0kb downstream 2.0kb downstream 3823 true Chr04: 8930222-8934044 Panicum hallii
Pahal.4G115700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 8932045-8934044 Panicum hallii
Pahal.4G115700 5.0kb upstream 5.0kb upstream 6823 true Chr04: 8925222-8932044 Panicum hallii
Pahal.4G115700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 8925222-8930221 Panicum hallii
Pahal.4G115700 5.0kb downstream 5.0kb downstream 6823 true Chr04: 8930222-8937044 Panicum hallii
Pahal.4G115700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 8932045-8937044 Panicum hallii
Pahal.4G115700 10.0kb upstream 10.0kb upstream 11823 true Chr04: 8920222-8932044 Panicum hallii
Pahal.4G115700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 8920222-8930221 Panicum hallii
Pahal.4G115700 10.0kb downstream 10.0kb downstream 11823 true Chr04: 8930222-8942044 Panicum hallii
Pahal.4G115700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 8932045-8942044 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191133 5267 Panicoideae View MSA
124591069 5269 Grass View MSA
122049918 5273 Angiosperm View MSA
121351151 5274 Embryophyte View MSA
123426970 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain