Gene : Pahal.4G206400 P. hallii v3.1
Defline:  (1 of 1) PTHR11558//PTHR11558:SF29 - SPERMIDINE/SPERMINE SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  1562
Name:  ? Pahal.4G206400 Secondary Identifier:  ? PAC:40369399
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii BSUBPOLYAMSYN-PWY Panicum hallii pathologic  
Phallii POLYAMINSYN3-PWY Panicum hallii pathologic  
Phallii PWY-7528 Panicum hallii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.4G206400 0.5kb upstream 0.5kb upstream 5492 true Chr04: 36270571-36276062 Panicum hallii
Pahal.4G206400 0.5kb upstream 0.5kb upstream 500 false Chr04: 36275563-36276062 Panicum hallii
Pahal.4G206400 0.5kb downstream 0.5kb downstream 5492 true Chr04: 36270071-36275562 Panicum hallii
Pahal.4G206400 0.5kb downstream 0.5kb downstream 500 false Chr04: 36270071-36270570 Panicum hallii
Pahal.4G206400 1.0kb upstream 1.0kb upstream 5992 true Chr04: 36270571-36276562 Panicum hallii
Pahal.4G206400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 36275563-36276562 Panicum hallii
Pahal.4G206400 1.0kb downstream 1.0kb downstream 5992 true Chr04: 36269571-36275562 Panicum hallii
Pahal.4G206400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 36269571-36270570 Panicum hallii
Pahal.4G206400 2.0kb upstream 2.0kb upstream 6992 true Chr04: 36270571-36277562 Panicum hallii
Pahal.4G206400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 36275563-36277562 Panicum hallii
Pahal.4G206400 2.0kb downstream 2.0kb downstream 6992 true Chr04: 36268571-36275562 Panicum hallii
Pahal.4G206400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 36268571-36270570 Panicum hallii
Pahal.4G206400 5.0kb upstream 5.0kb upstream 9992 true Chr04: 36270571-36280562 Panicum hallii
Pahal.4G206400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 36275563-36280562 Panicum hallii
Pahal.4G206400 5.0kb downstream 5.0kb downstream 9992 true Chr04: 36265571-36275562 Panicum hallii
Pahal.4G206400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 36265571-36270570 Panicum hallii
Pahal.4G206400 10.0kb upstream 10.0kb upstream 14992 true Chr04: 36270571-36285562 Panicum hallii
Pahal.4G206400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 36275563-36285562 Panicum hallii
Pahal.4G206400 10.0kb downstream 10.0kb downstream 14992 true Chr04: 36260571-36275562 Panicum hallii
Pahal.4G206400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 36260571-36270570 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187553 5267 Panicoideae View MSA
124577208 5269 Grass View MSA
122045666 5273 Angiosperm View MSA
121310481 5274 Embryophyte View MSA
123347953 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain