Gene : Pahal.4G348500 P. hallii v3.1
Defline:  (1 of 1) PTHR11404//PTHR11404:SF8 - SUPEROXIDE DISMUTASE 2 // SUPEROXIDE DISMUTASE [FE] 1, CHLOROPLASTIC Genomic Order:  2795
Name:  ? Pahal.4G348500 Secondary Identifier:  ? PAC:40371950
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii DETOX1-PWY Panicum hallii pathologic  
Phallii DETOX1-PWY-1 Panicum hallii pathologic  
Phallii PWY-6854 Panicum hallii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.4G348500 0.5kb upstream 0.5kb upstream 3184 true Chr04: 52058997-52062180 Panicum hallii
Pahal.4G348500 0.5kb upstream 0.5kb upstream 500 false Chr04: 52058997-52059496 Panicum hallii
Pahal.4G348500 0.5kb downstream 0.5kb downstream 3184 true Chr04: 52059497-52062680 Panicum hallii
Pahal.4G348500 0.5kb downstream 0.5kb downstream 500 false Chr04: 52062181-52062680 Panicum hallii
Pahal.4G348500 1.0kb upstream 1.0kb upstream 3684 true Chr04: 52058497-52062180 Panicum hallii
Pahal.4G348500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 52058497-52059496 Panicum hallii
Pahal.4G348500 1.0kb downstream 1.0kb downstream 3684 true Chr04: 52059497-52063180 Panicum hallii
Pahal.4G348500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 52062181-52063180 Panicum hallii
Pahal.4G348500 2.0kb upstream 2.0kb upstream 4684 true Chr04: 52057497-52062180 Panicum hallii
Pahal.4G348500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 52057497-52059496 Panicum hallii
Pahal.4G348500 2.0kb downstream 2.0kb downstream 4684 true Chr04: 52059497-52064180 Panicum hallii
Pahal.4G348500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 52062181-52064180 Panicum hallii
Pahal.4G348500 5.0kb upstream 5.0kb upstream 7684 true Chr04: 52054497-52062180 Panicum hallii
Pahal.4G348500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 52054497-52059496 Panicum hallii
Pahal.4G348500 5.0kb downstream 5.0kb downstream 7684 true Chr04: 52059497-52067180 Panicum hallii
Pahal.4G348500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 52062181-52067180 Panicum hallii
Pahal.4G348500 10.0kb upstream 10.0kb upstream 12684 true Chr04: 52049497-52062180 Panicum hallii
Pahal.4G348500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 52049497-52059496 Panicum hallii
Pahal.4G348500 10.0kb downstream 10.0kb downstream 12684 true Chr04: 52059497-52072180 Panicum hallii
Pahal.4G348500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 52062181-52072180 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186400 5267 Panicoideae View MSA
124572177 5269 Grass View MSA
122047747 5273 Angiosperm View MSA
121351401 5274 Embryophyte View MSA
123425969 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain