Gene : Pahal.5G374900 P. hallii v3.1
Defline:  (1 of 3) 1.1.1.25//4.2.1.10 - Shikimate dehydrogenase / Shikimate:NADP(+) oxidoreductase // 3-dehydroquinate dehydratase Genomic Order:  3218
Name:  ? Pahal.5G374900 Secondary Identifier:  ? PAC:40365873
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii ARO-PWY Panicum hallii pathologic  
Phallii PWY-6163 Panicum hallii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.5G374900 0.5kb upstream 0.5kb upstream 13779 true Chr05: 45932885-45946663 Panicum hallii
Pahal.5G374900 0.5kb upstream 0.5kb upstream 500 false Chr05: 45946164-45946663 Panicum hallii
Pahal.5G374900 0.5kb downstream 0.5kb downstream 13779 true Chr05: 45932385-45946163 Panicum hallii
Pahal.5G374900 0.5kb downstream 0.5kb downstream 500 false Chr05: 45932385-45932884 Panicum hallii
Pahal.5G374900 1.0kb upstream 1.0kb upstream 14279 true Chr05: 45932885-45947163 Panicum hallii
Pahal.5G374900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 45946164-45947163 Panicum hallii
Pahal.5G374900 1.0kb downstream 1.0kb downstream 14279 true Chr05: 45931885-45946163 Panicum hallii
Pahal.5G374900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 45931885-45932884 Panicum hallii
Pahal.5G374900 2.0kb upstream 2.0kb upstream 15279 true Chr05: 45932885-45948163 Panicum hallii
Pahal.5G374900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 45946164-45948163 Panicum hallii
Pahal.5G374900 2.0kb downstream 2.0kb downstream 15279 true Chr05: 45930885-45946163 Panicum hallii
Pahal.5G374900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 45930885-45932884 Panicum hallii
Pahal.5G374900 5.0kb upstream 5.0kb upstream 18279 true Chr05: 45932885-45951163 Panicum hallii
Pahal.5G374900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 45946164-45951163 Panicum hallii
Pahal.5G374900 5.0kb downstream 5.0kb downstream 18279 true Chr05: 45927885-45946163 Panicum hallii
Pahal.5G374900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 45927885-45932884 Panicum hallii
Pahal.5G374900 10.0kb upstream 10.0kb upstream 23279 true Chr05: 45932885-45956163 Panicum hallii
Pahal.5G374900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 45946164-45956163 Panicum hallii
Pahal.5G374900 10.0kb downstream 10.0kb downstream 23279 true Chr05: 45922885-45946163 Panicum hallii
Pahal.5G374900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 45922885-45932884 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189124 5267 Panicoideae View MSA
124570353 5269 Grass View MSA
122045026 5273 Angiosperm View MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain