Gene : Pahal.5G266200 P. hallii v3.1
Defline:  (1 of 2) PTHR12526:SF304 - STARCH SYNTHASE 4, CHLOROPLASTIC/AMYLOPLASTIC-RELATED Genomic Order:  2565
Name:  ? Pahal.5G266200 Secondary Identifier:  ? PAC:40361145
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii GLYCOGENSYNTH-PWY Panicum hallii pathologic  
Phallii PWY-622 Panicum hallii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.5G266200 0.5kb upstream 0.5kb upstream 7543 true Chr05: 17184528-17192070 Panicum hallii
Pahal.5G266200 0.5kb upstream 0.5kb upstream 500 false Chr05: 17191571-17192070 Panicum hallii
Pahal.5G266200 0.5kb downstream 0.5kb downstream 7543 true Chr05: 17184028-17191570 Panicum hallii
Pahal.5G266200 0.5kb downstream 0.5kb downstream 500 false Chr05: 17184028-17184527 Panicum hallii
Pahal.5G266200 1.0kb upstream 1.0kb upstream 8043 true Chr05: 17184528-17192570 Panicum hallii
Pahal.5G266200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 17191571-17192570 Panicum hallii
Pahal.5G266200 1.0kb downstream 1.0kb downstream 8043 true Chr05: 17183528-17191570 Panicum hallii
Pahal.5G266200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 17183528-17184527 Panicum hallii
Pahal.5G266200 2.0kb upstream 2.0kb upstream 9043 true Chr05: 17184528-17193570 Panicum hallii
Pahal.5G266200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 17191571-17193570 Panicum hallii
Pahal.5G266200 2.0kb downstream 2.0kb downstream 9043 true Chr05: 17182528-17191570 Panicum hallii
Pahal.5G266200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 17182528-17184527 Panicum hallii
Pahal.5G266200 5.0kb upstream 5.0kb upstream 12043 true Chr05: 17184528-17196570 Panicum hallii
Pahal.5G266200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 17191571-17196570 Panicum hallii
Pahal.5G266200 5.0kb downstream 5.0kb downstream 12043 true Chr05: 17179528-17191570 Panicum hallii
Pahal.5G266200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 17179528-17184527 Panicum hallii
Pahal.5G266200 10.0kb upstream 10.0kb upstream 17043 true Chr05: 17184528-17201570 Panicum hallii
Pahal.5G266200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 17191571-17201570 Panicum hallii
Pahal.5G266200 10.0kb downstream 10.0kb downstream 17043 true Chr05: 17174528-17191570 Panicum hallii
Pahal.5G266200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 17174528-17184527 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189391 5267 Panicoideae View MSA
124578861 5269 Grass View MSA
122042885 5273 Angiosperm View MSA
121344527 5274 Embryophyte View MSA
123428648 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain