Gene : Pahal.5G161800 P. hallii v3.1
Defline:  (1 of 3) 1.13.11.69//1.13.11.70 - Carlactone synthase // All-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase / Carotenoid cleavage dioxygenase 8 Genomic Order:  1565
Name:  ? Pahal.5G161800 Secondary Identifier:  ? PAC:40364712
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii PWY-7101 Panicum hallii pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.5G161800 0.5kb upstream 0.5kb upstream 4387 true Chr05: 9747884-9752270 Panicum hallii
Pahal.5G161800 0.5kb upstream 0.5kb upstream 500 false Chr05: 9747884-9748383 Panicum hallii
Pahal.5G161800 0.5kb downstream 0.5kb downstream 4387 true Chr05: 9748384-9752770 Panicum hallii
Pahal.5G161800 0.5kb downstream 0.5kb downstream 500 false Chr05: 9752271-9752770 Panicum hallii
Pahal.5G161800 1.0kb upstream 1.0kb upstream 4887 true Chr05: 9747384-9752270 Panicum hallii
Pahal.5G161800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 9747384-9748383 Panicum hallii
Pahal.5G161800 1.0kb downstream 1.0kb downstream 4887 true Chr05: 9748384-9753270 Panicum hallii
Pahal.5G161800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 9752271-9753270 Panicum hallii
Pahal.5G161800 2.0kb upstream 2.0kb upstream 5887 true Chr05: 9746384-9752270 Panicum hallii
Pahal.5G161800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 9746384-9748383 Panicum hallii
Pahal.5G161800 2.0kb downstream 2.0kb downstream 5887 true Chr05: 9748384-9754270 Panicum hallii
Pahal.5G161800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 9752271-9754270 Panicum hallii
Pahal.5G161800 5.0kb upstream 5.0kb upstream 8887 true Chr05: 9743384-9752270 Panicum hallii
Pahal.5G161800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 9743384-9748383 Panicum hallii
Pahal.5G161800 5.0kb downstream 5.0kb downstream 8887 true Chr05: 9748384-9757270 Panicum hallii
Pahal.5G161800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 9752271-9757270 Panicum hallii
Pahal.5G161800 10.0kb upstream 10.0kb upstream 13887 true Chr05: 9738384-9752270 Panicum hallii
Pahal.5G161800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 9738384-9748383 Panicum hallii
Pahal.5G161800 10.0kb downstream 10.0kb downstream 13887 true Chr05: 9748384-9762270 Panicum hallii
Pahal.5G161800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 9752271-9762270 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122117608 5267 Panicoideae View MSA
124587364 5269 Grass View MSA
122048984 5273 Angiosperm View MSA
123428919 5275 Viridiplantae View MSA
121344649 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain