Gene : Pahal.5G161700 P. hallii v3.1
Defline:  (1 of 3) 1.13.11.69//1.13.11.70 - Carlactone synthase // All-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase / Carotenoid cleavage dioxygenase 8 Genomic Order:  1564
Name:  ? Pahal.5G161700 Secondary Identifier:  ? PAC:40366333
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii PWY-7101 Panicum hallii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.5G161700 0.5kb upstream 0.5kb upstream 4297 true Chr05: 9740244-9744540 Panicum hallii
Pahal.5G161700 0.5kb upstream 0.5kb upstream 500 false Chr05: 9740244-9740743 Panicum hallii
Pahal.5G161700 0.5kb downstream 0.5kb downstream 4297 true Chr05: 9740744-9745040 Panicum hallii
Pahal.5G161700 0.5kb downstream 0.5kb downstream 500 false Chr05: 9744541-9745040 Panicum hallii
Pahal.5G161700 1.0kb upstream 1.0kb upstream 4797 true Chr05: 9739744-9744540 Panicum hallii
Pahal.5G161700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 9739744-9740743 Panicum hallii
Pahal.5G161700 1.0kb downstream 1.0kb downstream 4797 true Chr05: 9740744-9745540 Panicum hallii
Pahal.5G161700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 9744541-9745540 Panicum hallii
Pahal.5G161700 2.0kb upstream 2.0kb upstream 5797 true Chr05: 9738744-9744540 Panicum hallii
Pahal.5G161700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 9738744-9740743 Panicum hallii
Pahal.5G161700 2.0kb downstream 2.0kb downstream 5797 true Chr05: 9740744-9746540 Panicum hallii
Pahal.5G161700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 9744541-9746540 Panicum hallii
Pahal.5G161700 5.0kb upstream 5.0kb upstream 8797 true Chr05: 9735744-9744540 Panicum hallii
Pahal.5G161700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 9735744-9740743 Panicum hallii
Pahal.5G161700 5.0kb downstream 5.0kb downstream 8797 true Chr05: 9740744-9749540 Panicum hallii
Pahal.5G161700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 9744541-9749540 Panicum hallii
Pahal.5G161700 10.0kb upstream 10.0kb upstream 13797 true Chr05: 9730744-9744540 Panicum hallii
Pahal.5G161700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 9730744-9740743 Panicum hallii
Pahal.5G161700 10.0kb downstream 10.0kb downstream 13797 true Chr05: 9740744-9754540 Panicum hallii
Pahal.5G161700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 9744541-9754540 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185928 5267 Panicoideae View MSA
124587364 5269 Grass View MSA
122048984 5273 Angiosperm View MSA
123428919 5275 Viridiplantae View MSA
121344649 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain