Gene : Pahal.5G202700 P. hallii v3.1

Defline:  (1 of 1) PTHR10459:SF38 - DNA LIGASE Genomic Order:  1961
Name:  ? Pahal.5G202700 Secondary Identifier:  ? PAC:40365713

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.5G202700 0.5kb upstream 0.5kb upstream 14789 true Chr05: 12311473-12326261 Panicum hallii
Pahal.5G202700 0.5kb upstream 0.5kb upstream 500 false Chr05: 12311473-12311972 Panicum hallii
Pahal.5G202700 0.5kb downstream 0.5kb downstream 14789 true Chr05: 12311973-12326761 Panicum hallii
Pahal.5G202700 0.5kb downstream 0.5kb downstream 500 false Chr05: 12326262-12326761 Panicum hallii
Pahal.5G202700 1.0kb upstream 1.0kb upstream 15289 true Chr05: 12310973-12326261 Panicum hallii
Pahal.5G202700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 12310973-12311972 Panicum hallii
Pahal.5G202700 1.0kb downstream 1.0kb downstream 15289 true Chr05: 12311973-12327261 Panicum hallii
Pahal.5G202700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 12326262-12327261 Panicum hallii
Pahal.5G202700 2.0kb upstream 2.0kb upstream 16289 true Chr05: 12309973-12326261 Panicum hallii
Pahal.5G202700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 12309973-12311972 Panicum hallii
Pahal.5G202700 2.0kb downstream 2.0kb downstream 16289 true Chr05: 12311973-12328261 Panicum hallii
Pahal.5G202700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 12326262-12328261 Panicum hallii
Pahal.5G202700 5.0kb upstream 5.0kb upstream 19289 true Chr05: 12306973-12326261 Panicum hallii
Pahal.5G202700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 12306973-12311972 Panicum hallii
Pahal.5G202700 5.0kb downstream 5.0kb downstream 19289 true Chr05: 12311973-12331261 Panicum hallii
Pahal.5G202700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 12326262-12331261 Panicum hallii
Pahal.5G202700 10.0kb upstream 10.0kb upstream 24289 true Chr05: 12301973-12326261 Panicum hallii
Pahal.5G202700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 12301973-12311972 Panicum hallii
Pahal.5G202700 10.0kb downstream 10.0kb downstream 24289 true Chr05: 12311973-12336261 Panicum hallii
Pahal.5G202700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 12326262-12336261 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181784 5267 Panicoideae View MSA
124574730 5269 Grass View MSA
122046861 5273 Angiosperm View MSA
121351448 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain