Gene : Pahal.5G452400 P. hallii v3.1
Defline:  (1 of 1) PTHR11946:SF7 - LEUCINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Genomic Order:  3901
Name:  ? Pahal.5G452400 Secondary Identifier:  ? PAC:40365104
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii TRNA-CHARGING-PWY Panicum hallii pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.5G452400 0.5kb upstream 0.5kb upstream 9262 true Chr05: 53794401-53803662 Panicum hallii
Pahal.5G452400 0.5kb upstream 0.5kb upstream 500 false Chr05: 53803163-53803662 Panicum hallii
Pahal.5G452400 0.5kb downstream 0.5kb downstream 9262 true Chr05: 53793901-53803162 Panicum hallii
Pahal.5G452400 0.5kb downstream 0.5kb downstream 500 false Chr05: 53793901-53794400 Panicum hallii
Pahal.5G452400 1.0kb upstream 1.0kb upstream 9762 true Chr05: 53794401-53804162 Panicum hallii
Pahal.5G452400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 53803163-53804162 Panicum hallii
Pahal.5G452400 1.0kb downstream 1.0kb downstream 9762 true Chr05: 53793401-53803162 Panicum hallii
Pahal.5G452400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 53793401-53794400 Panicum hallii
Pahal.5G452400 2.0kb upstream 2.0kb upstream 10762 true Chr05: 53794401-53805162 Panicum hallii
Pahal.5G452400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 53803163-53805162 Panicum hallii
Pahal.5G452400 2.0kb downstream 2.0kb downstream 10762 true Chr05: 53792401-53803162 Panicum hallii
Pahal.5G452400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 53792401-53794400 Panicum hallii
Pahal.5G452400 5.0kb upstream 5.0kb upstream 13762 true Chr05: 53794401-53808162 Panicum hallii
Pahal.5G452400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 53803163-53808162 Panicum hallii
Pahal.5G452400 5.0kb downstream 5.0kb downstream 13762 true Chr05: 53789401-53803162 Panicum hallii
Pahal.5G452400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 53789401-53794400 Panicum hallii
Pahal.5G452400 10.0kb upstream 10.0kb upstream 18762 true Chr05: 53794401-53813162 Panicum hallii
Pahal.5G452400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 53803163-53813162 Panicum hallii
Pahal.5G452400 10.0kb downstream 10.0kb downstream 18762 true Chr05: 53784401-53803162 Panicum hallii
Pahal.5G452400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 53784401-53794400 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041369 5273 Angiosperm View MSA
122190357 5267 Panicoideae View MSA
124571312 5269 Grass View MSA
121347479 5274 Embryophyte View MSA
123424257 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain