Gene : Pahal.6G099200 P. hallii v3.1

Defline:  (1 of 2) K18798 - protein AFG1 (AFG1, LACE1) Genomic Order:  902
Name:  ? Pahal.6G099200 Secondary Identifier:  ? PAC:40382171

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii ANAEROFRUCAT-PWY Panicum hallii pathologic  
Phallii ANAGLYCOLYSIS-PWY Panicum hallii pathologic  
Phallii GLUCOSE1PMETAB-PWY Panicum hallii pathologic  
Phallii PWY-621 Panicum hallii pathologic  
Phallii PWY-7238 Panicum hallii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.6G099200 0.5kb upstream 0.5kb upstream 7822 true Chr06: 10236662-10244483 Panicum hallii
Pahal.6G099200 0.5kb upstream 0.5kb upstream 500 false Chr06: 10243984-10244483 Panicum hallii
Pahal.6G099200 0.5kb downstream 0.5kb downstream 7822 true Chr06: 10236162-10243983 Panicum hallii
Pahal.6G099200 0.5kb downstream 0.5kb downstream 500 false Chr06: 10236162-10236661 Panicum hallii
Pahal.6G099200 1.0kb upstream 1.0kb upstream 8322 true Chr06: 10236662-10244983 Panicum hallii
Pahal.6G099200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 10243984-10244983 Panicum hallii
Pahal.6G099200 1.0kb downstream 1.0kb downstream 8322 true Chr06: 10235662-10243983 Panicum hallii
Pahal.6G099200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 10235662-10236661 Panicum hallii
Pahal.6G099200 2.0kb upstream 2.0kb upstream 9322 true Chr06: 10236662-10245983 Panicum hallii
Pahal.6G099200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 10243984-10245983 Panicum hallii
Pahal.6G099200 2.0kb downstream 2.0kb downstream 9322 true Chr06: 10234662-10243983 Panicum hallii
Pahal.6G099200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 10234662-10236661 Panicum hallii
Pahal.6G099200 5.0kb upstream 5.0kb upstream 12322 true Chr06: 10236662-10248983 Panicum hallii
Pahal.6G099200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 10243984-10248983 Panicum hallii
Pahal.6G099200 5.0kb downstream 5.0kb downstream 12322 true Chr06: 10231662-10243983 Panicum hallii
Pahal.6G099200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 10231662-10236661 Panicum hallii
Pahal.6G099200 10.0kb upstream 10.0kb upstream 17322 true Chr06: 10236662-10253983 Panicum hallii
Pahal.6G099200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 10243984-10253983 Panicum hallii
Pahal.6G099200 10.0kb downstream 10.0kb downstream 17322 true Chr06: 10226662-10243983 Panicum hallii
Pahal.6G099200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 10226662-10236661 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194272 5267 Panicoideae View MSA
124577814 5269 Grass View MSA
122047660 5273 Angiosperm View MSA
121344773 5274 Embryophyte View MSA
123427307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain