Gene : Pahal.9G095400 P. hallii v3.1
Defline:  (1 of 1) PTHR11680:SF10 - SERINE HYDROXYMETHYLTRANSFERASE 1, MITOCHONDRIAL Genomic Order:  934
Name:  ? Pahal.9G095400 Secondary Identifier:  ? PAC:40358292
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii GLYSYN-PWY Panicum hallii pathologic  
Phallii PWY-2161 Panicum hallii pathologic  
Phallii PWY-3841 Panicum hallii pathologic  
Phallii SER-GLYSYN-PWY Panicum hallii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.9G095400 0.5kb upstream 0.5kb upstream 5720   true Chr09: 5472685-5478404 Panicum hallii
Pahal.9G095400 0.5kb upstream 0.5kb upstream 500   false Chr09: 5477905-5478404 Panicum hallii
Pahal.9G095400 0.5kb downstream 0.5kb downstream 5720   true Chr09: 5472185-5477904 Panicum hallii
Pahal.9G095400 0.5kb downstream 0.5kb downstream 500   false Chr09: 5472185-5472684 Panicum hallii
Pahal.9G095400 1.0kb upstream 1.0kb upstream 6220   true Chr09: 5472685-5478904 Panicum hallii
Pahal.9G095400 1.0kb upstream 1.0kb upstream 1000   false Chr09: 5477905-5478904 Panicum hallii
Pahal.9G095400 1.0kb downstream 1.0kb downstream 6220   true Chr09: 5471685-5477904 Panicum hallii
Pahal.9G095400 1.0kb downstream 1.0kb downstream 1000   false Chr09: 5471685-5472684 Panicum hallii
Pahal.9G095400 2.0kb upstream 2.0kb upstream 7220   true Chr09: 5472685-5479904 Panicum hallii
Pahal.9G095400 2.0kb upstream 2.0kb upstream 2000   false Chr09: 5477905-5479904 Panicum hallii
Pahal.9G095400 2.0kb downstream 2.0kb downstream 7220   true Chr09: 5470685-5477904 Panicum hallii
Pahal.9G095400 2.0kb downstream 2.0kb downstream 2000   false Chr09: 5470685-5472684 Panicum hallii
Pahal.9G095400 5.0kb upstream 5.0kb upstream 10220   true Chr09: 5472685-5482904 Panicum hallii
Pahal.9G095400 5.0kb upstream 5.0kb upstream 5000   false Chr09: 5477905-5482904 Panicum hallii
Pahal.9G095400 5.0kb downstream 5.0kb downstream 10220   true Chr09: 5467685-5477904 Panicum hallii
Pahal.9G095400 5.0kb downstream 5.0kb downstream 5000   false Chr09: 5467685-5472684 Panicum hallii
Pahal.9G095400 10.0kb upstream 10.0kb upstream 15220   true Chr09: 5472685-5487904 Panicum hallii
Pahal.9G095400 10.0kb upstream 10.0kb upstream 10000   false Chr09: 5477905-5487904 Panicum hallii
Pahal.9G095400 10.0kb downstream 10.0kb downstream 15220   true Chr09: 5462685-5477904 Panicum hallii
Pahal.9G095400 10.0kb downstream 10.0kb downstream 10000   false Chr09: 5462685-5472684 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187926 5267 Panicoideae View MSA
124570013 5269 Grass View MSA
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain