Gene : Pahal.3G399900 P. hallii v3.1
Defline:  (1 of 5) K01602 - ribulose-bisphosphate carboxylase small chain (rbcS) Genomic Order:  3409
Name:  ? Pahal.3G399900 Secondary Identifier:  ? PAC:40348220
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii CALVIN-PWY Panicum hallii pathologic  
Phallii PHOTOALL-PWY Panicum hallii pathologic  
Phallii PWY-5723 Panicum hallii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.3G399900 0.5kb upstream 0.5kb upstream 1548 true Chr03: 49815352-49816899 Panicum hallii
Pahal.3G399900 0.5kb upstream 0.5kb upstream 500 false Chr03: 49815352-49815851 Panicum hallii
Pahal.3G399900 0.5kb downstream 0.5kb downstream 1548 true Chr03: 49815852-49817399 Panicum hallii
Pahal.3G399900 0.5kb downstream 0.5kb downstream 500 false Chr03: 49816900-49817399 Panicum hallii
Pahal.3G399900 1.0kb upstream 1.0kb upstream 2048 true Chr03: 49814852-49816899 Panicum hallii
Pahal.3G399900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 49814852-49815851 Panicum hallii
Pahal.3G399900 1.0kb downstream 1.0kb downstream 2048 true Chr03: 49815852-49817899 Panicum hallii
Pahal.3G399900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 49816900-49817899 Panicum hallii
Pahal.3G399900 2.0kb upstream 2.0kb upstream 3048 true Chr03: 49813852-49816899 Panicum hallii
Pahal.3G399900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 49813852-49815851 Panicum hallii
Pahal.3G399900 2.0kb downstream 2.0kb downstream 3048 true Chr03: 49815852-49818899 Panicum hallii
Pahal.3G399900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 49816900-49818899 Panicum hallii
Pahal.3G399900 5.0kb upstream 5.0kb upstream 6048 true Chr03: 49810852-49816899 Panicum hallii
Pahal.3G399900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 49810852-49815851 Panicum hallii
Pahal.3G399900 5.0kb downstream 5.0kb downstream 6048 true Chr03: 49815852-49821899 Panicum hallii
Pahal.3G399900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 49816900-49821899 Panicum hallii
Pahal.3G399900 10.0kb upstream 10.0kb upstream 11048 true Chr03: 49805852-49816899 Panicum hallii
Pahal.3G399900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 49805852-49815851 Panicum hallii
Pahal.3G399900 10.0kb downstream 10.0kb downstream 11048 true Chr03: 49815852-49826899 Panicum hallii
Pahal.3G399900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 49816900-49826899 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199516 5267 Panicoideae View MSA
124590513 5269 Grass View MSA
122046951 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain