Gene : Pahal.9G624800 P. hallii v3.1
Defline:  (1 of 1) 1.14.13.129 - Beta-carotene 3-hydroxylase / Beta-carotene 3,3'-monooxygenase Genomic Order:  5560
Name:  ? Pahal.9G624800 Secondary Identifier:  ? PAC:40354075
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii CAROTENOID-PWY Panicum hallii pathologic  
Phallii PWY-5944 Panicum hallii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.9G624800 0.5kb upstream 0.5kb upstream 2589   true Chr09: 72549172-72551760 Panicum hallii
Pahal.9G624800 0.5kb upstream 0.5kb upstream 500   false Chr09: 72549172-72549671 Panicum hallii
Pahal.9G624800 0.5kb downstream 0.5kb downstream 2589   true Chr09: 72549672-72552260 Panicum hallii
Pahal.9G624800 0.5kb downstream 0.5kb downstream 500   false Chr09: 72551761-72552260 Panicum hallii
Pahal.9G624800 1.0kb upstream 1.0kb upstream 3089   true Chr09: 72548672-72551760 Panicum hallii
Pahal.9G624800 1.0kb upstream 1.0kb upstream 1000   false Chr09: 72548672-72549671 Panicum hallii
Pahal.9G624800 1.0kb downstream 1.0kb downstream 3089   true Chr09: 72549672-72552760 Panicum hallii
Pahal.9G624800 1.0kb downstream 1.0kb downstream 1000   false Chr09: 72551761-72552760 Panicum hallii
Pahal.9G624800 2.0kb upstream 2.0kb upstream 4089   true Chr09: 72547672-72551760 Panicum hallii
Pahal.9G624800 2.0kb upstream 2.0kb upstream 2000   false Chr09: 72547672-72549671 Panicum hallii
Pahal.9G624800 2.0kb downstream 2.0kb downstream 4089   true Chr09: 72549672-72553760 Panicum hallii
Pahal.9G624800 2.0kb downstream 2.0kb downstream 2000   false Chr09: 72551761-72553760 Panicum hallii
Pahal.9G624800 5.0kb upstream 5.0kb upstream 7089   true Chr09: 72544672-72551760 Panicum hallii
Pahal.9G624800 5.0kb upstream 5.0kb upstream 5000   false Chr09: 72544672-72549671 Panicum hallii
Pahal.9G624800 5.0kb downstream 5.0kb downstream 7089   true Chr09: 72549672-72556760 Panicum hallii
Pahal.9G624800 5.0kb downstream 5.0kb downstream 5000   false Chr09: 72551761-72556760 Panicum hallii
Pahal.9G624800 10.0kb upstream 10.0kb upstream 12089   true Chr09: 72539672-72551760 Panicum hallii
Pahal.9G624800 10.0kb upstream 10.0kb upstream 10000   false Chr09: 72539672-72549671 Panicum hallii
Pahal.9G624800 10.0kb downstream 10.0kb downstream 12089   true Chr09: 72549672-72561760 Panicum hallii
Pahal.9G624800 10.0kb downstream 10.0kb downstream 10000   false Chr09: 72551761-72561760 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190924 5267 Panicoideae View MSA
124586516 5269 Grass View MSA
122046641 5273 Angiosperm View MSA
123429104 5275 Viridiplantae View MSA
121351007 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain