Gene : Pahal.1G098100 P. hallii v3.1
Defline:  (1 of 1) PTHR11739:SF4 - CITRATE SYNTHASE, PEROXISOMAL Genomic Order:  944
Name:  ? Pahal.1G098100 Secondary Identifier:  ? PAC:40379068
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii GLYOXYLATE-BYPASS Panicum hallii pathologic  
Phallii PWY-5464 Panicum hallii pathologic  
Phallii PWY-561 Panicum hallii pathologic  
Phallii PWY-5690 Panicum hallii pathologic  
Phallii PWY-6549 Panicum hallii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.1G098100 0.5kb upstream 0.5kb upstream 5659 true Chr01: 7124253-7129911 Panicum hallii
Pahal.1G098100 0.5kb upstream 0.5kb upstream 500 false Chr01: 7129412-7129911 Panicum hallii
Pahal.1G098100 0.5kb downstream 0.5kb downstream 5659 true Chr01: 7123753-7129411 Panicum hallii
Pahal.1G098100 0.5kb downstream 0.5kb downstream 500 false Chr01: 7123753-7124252 Panicum hallii
Pahal.1G098100 1.0kb upstream 1.0kb upstream 6159 true Chr01: 7124253-7130411 Panicum hallii
Pahal.1G098100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 7129412-7130411 Panicum hallii
Pahal.1G098100 1.0kb downstream 1.0kb downstream 6159 true Chr01: 7123253-7129411 Panicum hallii
Pahal.1G098100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 7123253-7124252 Panicum hallii
Pahal.1G098100 2.0kb upstream 2.0kb upstream 7159 true Chr01: 7124253-7131411 Panicum hallii
Pahal.1G098100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 7129412-7131411 Panicum hallii
Pahal.1G098100 2.0kb downstream 2.0kb downstream 7159 true Chr01: 7122253-7129411 Panicum hallii
Pahal.1G098100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 7122253-7124252 Panicum hallii
Pahal.1G098100 5.0kb upstream 5.0kb upstream 10159 true Chr01: 7124253-7134411 Panicum hallii
Pahal.1G098100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 7129412-7134411 Panicum hallii
Pahal.1G098100 5.0kb downstream 5.0kb downstream 10159 true Chr01: 7119253-7129411 Panicum hallii
Pahal.1G098100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 7119253-7124252 Panicum hallii
Pahal.1G098100 10.0kb upstream 10.0kb upstream 15159 true Chr01: 7124253-7139411 Panicum hallii
Pahal.1G098100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 7129412-7139411 Panicum hallii
Pahal.1G098100 10.0kb downstream 10.0kb downstream 15159 true Chr01: 7114253-7129411 Panicum hallii
Pahal.1G098100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 7114253-7124252 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179324 5267 Panicoideae View MSA
124570333 5269 Grass View MSA
122044026 5273 Angiosperm View MSA
121344650 5274 Embryophyte View MSA
123424100 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain