Gene : Pahal.1G107800 P. hallii v3.1

Defline:  (1 of 1) K12479 - vacuolar protein sorting-associated protein 45 (VPS45) Genomic Order:  1030
Name:  ? Pahal.1G107800 Secondary Identifier:  ? PAC:40381595

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.1G107800 0.5kb upstream 0.5kb upstream 6795 true Chr01: 8048599-8055393 Panicum hallii
Pahal.1G107800 0.5kb upstream 0.5kb upstream 500 false Chr01: 8054894-8055393 Panicum hallii
Pahal.1G107800 0.5kb downstream 0.5kb downstream 6795 true Chr01: 8048099-8054893 Panicum hallii
Pahal.1G107800 0.5kb downstream 0.5kb downstream 500 false Chr01: 8048099-8048598 Panicum hallii
Pahal.1G107800 1.0kb upstream 1.0kb upstream 7295 true Chr01: 8048599-8055893 Panicum hallii
Pahal.1G107800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 8054894-8055893 Panicum hallii
Pahal.1G107800 1.0kb downstream 1.0kb downstream 7295 true Chr01: 8047599-8054893 Panicum hallii
Pahal.1G107800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 8047599-8048598 Panicum hallii
Pahal.1G107800 2.0kb upstream 2.0kb upstream 8295 true Chr01: 8048599-8056893 Panicum hallii
Pahal.1G107800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 8054894-8056893 Panicum hallii
Pahal.1G107800 2.0kb downstream 2.0kb downstream 8295 true Chr01: 8046599-8054893 Panicum hallii
Pahal.1G107800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 8046599-8048598 Panicum hallii
Pahal.1G107800 5.0kb upstream 5.0kb upstream 11295 true Chr01: 8048599-8059893 Panicum hallii
Pahal.1G107800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 8054894-8059893 Panicum hallii
Pahal.1G107800 5.0kb downstream 5.0kb downstream 11295 true Chr01: 8043599-8054893 Panicum hallii
Pahal.1G107800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 8043599-8048598 Panicum hallii
Pahal.1G107800 10.0kb upstream 10.0kb upstream 16295 true Chr01: 8048599-8064893 Panicum hallii
Pahal.1G107800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 8054894-8064893 Panicum hallii
Pahal.1G107800 10.0kb downstream 10.0kb downstream 16295 true Chr01: 8038599-8054893 Panicum hallii
Pahal.1G107800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 8038599-8048598 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186231 5267 Panicoideae View MSA
124576173 5269 Grass View MSA
122044775 5273 Angiosperm View MSA
121347331 5274 Embryophyte View MSA
123424934 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain