Gene : Pahal.1G051900 P. hallii v3.1

Defline:  (1 of 1) PTHR10836//PTHR10836:SF46 - GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  506
Name:  ? Pahal.1G051900 Secondary Identifier:  ? PAC:40381465

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii ANAEROFRUCAT-PWY Panicum hallii pathologic  
Phallii ANAGLYCOLYSIS-PWY Panicum hallii pathologic  
Phallii GLUCONEO-PWY Panicum hallii pathologic  
Phallii PWY-1042 Panicum hallii pathologic  
Phallii PWY-5464 Panicum hallii pathologic  
Phallii SUCSYN-PWY Panicum hallii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.1G051900 0.5kb upstream 0.5kb upstream 6154 true Chr01: 3514086-3520239 Panicum hallii
Pahal.1G051900 0.5kb upstream 0.5kb upstream 500 false Chr01: 3514086-3514585 Panicum hallii
Pahal.1G051900 0.5kb downstream 0.5kb downstream 6154 true Chr01: 3514586-3520739 Panicum hallii
Pahal.1G051900 0.5kb downstream 0.5kb downstream 500 false Chr01: 3520240-3520739 Panicum hallii
Pahal.1G051900 1.0kb upstream 1.0kb upstream 6654 true Chr01: 3513586-3520239 Panicum hallii
Pahal.1G051900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3513586-3514585 Panicum hallii
Pahal.1G051900 1.0kb downstream 1.0kb downstream 6654 true Chr01: 3514586-3521239 Panicum hallii
Pahal.1G051900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3520240-3521239 Panicum hallii
Pahal.1G051900 2.0kb upstream 2.0kb upstream 7654 true Chr01: 3512586-3520239 Panicum hallii
Pahal.1G051900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3512586-3514585 Panicum hallii
Pahal.1G051900 2.0kb downstream 2.0kb downstream 7654 true Chr01: 3514586-3522239 Panicum hallii
Pahal.1G051900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3520240-3522239 Panicum hallii
Pahal.1G051900 5.0kb upstream 5.0kb upstream 10654 true Chr01: 3509586-3520239 Panicum hallii
Pahal.1G051900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3509586-3514585 Panicum hallii
Pahal.1G051900 5.0kb downstream 5.0kb downstream 10654 true Chr01: 3514586-3525239 Panicum hallii
Pahal.1G051900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3520240-3525239 Panicum hallii
Pahal.1G051900 10.0kb upstream 10.0kb upstream 15654 true Chr01: 3504586-3520239 Panicum hallii
Pahal.1G051900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3504586-3514585 Panicum hallii
Pahal.1G051900 10.0kb downstream 10.0kb downstream 15654 true Chr01: 3514586-3530239 Panicum hallii
Pahal.1G051900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3520240-3530239 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175260 5267 Panicoideae View MSA
124572618 5269 Grass View MSA
122042179 5273 Angiosperm View MSA
121345581 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain