Gene : Pahal.1G189600 P. hallii v3.1

Defline:  (1 of 2) K09667 - protein O-GlcNAc transferase (OGT) Genomic Order:  1538
Name:  ? Pahal.1G189600 Secondary Identifier:  ? PAC:40379086

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii PWY-7437 Panicum hallii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.1G189600 0.5kb upstream 0.5kb upstream 10885 true Chr01: 27942225-27953109 Panicum hallii
Pahal.1G189600 0.5kb upstream 0.5kb upstream 500 false Chr01: 27942225-27942724 Panicum hallii
Pahal.1G189600 0.5kb downstream 0.5kb downstream 10885 true Chr01: 27942725-27953609 Panicum hallii
Pahal.1G189600 0.5kb downstream 0.5kb downstream 500 false Chr01: 27953110-27953609 Panicum hallii
Pahal.1G189600 1.0kb upstream 1.0kb upstream 11385 true Chr01: 27941725-27953109 Panicum hallii
Pahal.1G189600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 27941725-27942724 Panicum hallii
Pahal.1G189600 1.0kb downstream 1.0kb downstream 11385 true Chr01: 27942725-27954109 Panicum hallii
Pahal.1G189600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 27953110-27954109 Panicum hallii
Pahal.1G189600 2.0kb upstream 2.0kb upstream 12385 true Chr01: 27940725-27953109 Panicum hallii
Pahal.1G189600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 27940725-27942724 Panicum hallii
Pahal.1G189600 2.0kb downstream 2.0kb downstream 12385 true Chr01: 27942725-27955109 Panicum hallii
Pahal.1G189600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 27953110-27955109 Panicum hallii
Pahal.1G189600 5.0kb upstream 5.0kb upstream 15385 true Chr01: 27937725-27953109 Panicum hallii
Pahal.1G189600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 27937725-27942724 Panicum hallii
Pahal.1G189600 5.0kb downstream 5.0kb downstream 15385 true Chr01: 27942725-27958109 Panicum hallii
Pahal.1G189600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 27953110-27958109 Panicum hallii
Pahal.1G189600 10.0kb upstream 10.0kb upstream 20385 true Chr01: 27932725-27953109 Panicum hallii
Pahal.1G189600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 27932725-27942724 Panicum hallii
Pahal.1G189600 10.0kb downstream 10.0kb downstream 20385 true Chr01: 27942725-27963109 Panicum hallii
Pahal.1G189600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 27953110-27963109 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188319 5267 Panicoideae View MSA
124589128 5269 Grass View MSA
122047286 5273 Angiosperm View MSA
121344424 5274 Embryophyte View MSA
123428836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain