Gene : Pahal.1G347800 P. hallii v3.1
Defline:  (1 of 1) 4.6.1.12 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase / MECDP-synthase Genomic Order:  2809
Name:  ? Pahal.1G347800 Secondary Identifier:  ? PAC:40378366
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii PWY-7560 Panicum hallii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.1G347800 0.5kb upstream 0.5kb upstream 2498 true Chr01: 52302206-52304703 Panicum hallii
Pahal.1G347800 0.5kb upstream 0.5kb upstream 500 false Chr01: 52304204-52304703 Panicum hallii
Pahal.1G347800 0.5kb downstream 0.5kb downstream 2498 true Chr01: 52301706-52304203 Panicum hallii
Pahal.1G347800 0.5kb downstream 0.5kb downstream 500 false Chr01: 52301706-52302205 Panicum hallii
Pahal.1G347800 1.0kb upstream 1.0kb upstream 2998 true Chr01: 52302206-52305203 Panicum hallii
Pahal.1G347800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 52304204-52305203 Panicum hallii
Pahal.1G347800 1.0kb downstream 1.0kb downstream 2998 true Chr01: 52301206-52304203 Panicum hallii
Pahal.1G347800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 52301206-52302205 Panicum hallii
Pahal.1G347800 2.0kb upstream 2.0kb upstream 3998 true Chr01: 52302206-52306203 Panicum hallii
Pahal.1G347800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 52304204-52306203 Panicum hallii
Pahal.1G347800 2.0kb downstream 2.0kb downstream 3998 true Chr01: 52300206-52304203 Panicum hallii
Pahal.1G347800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 52300206-52302205 Panicum hallii
Pahal.1G347800 5.0kb upstream 5.0kb upstream 6998 true Chr01: 52302206-52309203 Panicum hallii
Pahal.1G347800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 52304204-52309203 Panicum hallii
Pahal.1G347800 5.0kb downstream 5.0kb downstream 6998 true Chr01: 52297206-52304203 Panicum hallii
Pahal.1G347800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 52297206-52302205 Panicum hallii
Pahal.1G347800 10.0kb upstream 10.0kb upstream 11998 true Chr01: 52302206-52314203 Panicum hallii
Pahal.1G347800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 52304204-52314203 Panicum hallii
Pahal.1G347800 10.0kb downstream 10.0kb downstream 11998 true Chr01: 52292206-52304203 Panicum hallii
Pahal.1G347800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 52292206-52302205 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192729 5267 Panicoideae View MSA
124578678 5269 Grass View MSA
122042234 5273 Angiosperm View MSA
121344039 5274 Embryophyte View MSA
123423768 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain