Gene : Glyma.05G008200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21198 - GLUTAMATE RACEMASE Genomic Order:  82
Name:  ? Glyma.05G008200 Secondary Identifier:  ? PAC:30527140
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G008200 0.5kb upstream 0.5kb upstream 8789 true Chr05: 762252-771040 Glycine max
Glyma.05G008200 0.5kb upstream 0.5kb upstream 500 false Chr05: 762252-762751 Glycine max
Glyma.05G008200 0.5kb downstream 0.5kb downstream 8789 true Chr05: 762752-771540 Glycine max
Glyma.05G008200 0.5kb downstream 0.5kb downstream 500 false Chr05: 771041-771540 Glycine max
Glyma.05G008200 1.0kb upstream 1.0kb upstream 9289 true Chr05: 761752-771040 Glycine max
Glyma.05G008200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 761752-762751 Glycine max
Glyma.05G008200 1.0kb downstream 1.0kb downstream 9289 true Chr05: 762752-772040 Glycine max
Glyma.05G008200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 771041-772040 Glycine max
Glyma.05G008200 2.0kb upstream 2.0kb upstream 10289 true Chr05: 760752-771040 Glycine max
Glyma.05G008200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 760752-762751 Glycine max
Glyma.05G008200 2.0kb downstream 2.0kb downstream 10289 true Chr05: 762752-773040 Glycine max
Glyma.05G008200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 771041-773040 Glycine max
Glyma.05G008200 5.0kb upstream 5.0kb upstream 13289 true Chr05: 757752-771040 Glycine max
Glyma.05G008200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 757752-762751 Glycine max
Glyma.05G008200 5.0kb downstream 5.0kb downstream 13289 true Chr05: 762752-776040 Glycine max
Glyma.05G008200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 771041-776040 Glycine max
Glyma.05G008200 10.0kb upstream 10.0kb upstream 18289 true Chr05: 752752-771040 Glycine max
Glyma.05G008200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 752752-762751 Glycine max
Glyma.05G008200 10.0kb downstream 10.0kb downstream 18289 true Chr05: 762752-781040 Glycine max
Glyma.05G008200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 771041-781040 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313050 5265 Fabidae View MSA
124070662 5270 Rosid View MSA
123749340 5271 Pentapetalae View MSA
122786043 5272 Eudicot View MSA
122047895 5273 Angiosperm View MSA
121310810 5274 Embryophyte View MSA
123348207 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.13705 0.0 5.83234    
cufflinks 1.29342 0.0 5.6993    
cufflinks 0.350667 0.0 2.03725    
cufflinks 0.467878 0.0 2.77895    
cufflinks 1.29391 0.0 6.043    
cufflinks 0.169574 0.0 1.60529 Low  
cufflinks 0.0940006 0.0 1.0212 Low Low
cufflinks 6.96778 0.0 22.8006   High
cufflinks 0.34626 0.0 9.08603    
cufflinks 0.072     Low  
cufflinks 0.012     Low  
cufflinks 0.067     Low  
cufflinks 0.039     Low  
cufflinks 0.238       High
cufflinks 0.004     Low Low
cufflinks 0.003     Low Low
cufflinks 0.048     Low  
cufflinks 0.134       High
cufflinks 0.157       High
cufflinks 0.011     Low  
cufflinks 0.005     Low Low
cufflinks 0.014     Low  
cufflinks 0.05     Low  
cufflinks 0.006     Low  
cufflinks 0.006     Low  
cufflinks 0.005     Low Low

0 Strain