Gene : Glyma.05G001200 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR23001:SF8 - EUKARYOTIC TRANSLATION INITIATION FACTOR 5-2-RELATED Genomic Order:  12
Name:  ? Glyma.05G001200 Secondary Identifier:  ? PAC:30524902
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G001200 0.5kb upstream 0.5kb upstream 2971 true Chr05: 97958-100928 Glycine max
Glyma.05G001200 0.5kb upstream 0.5kb upstream 500 false Chr05: 100429-100928 Glycine max
Glyma.05G001200 0.5kb downstream 0.5kb downstream 2971 true Chr05: 97458-100428 Glycine max
Glyma.05G001200 0.5kb downstream 0.5kb downstream 500 false Chr05: 97458-97957 Glycine max
Glyma.05G001200 1.0kb upstream 1.0kb upstream 3471 true Chr05: 97958-101428 Glycine max
Glyma.05G001200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 100429-101428 Glycine max
Glyma.05G001200 1.0kb downstream 1.0kb downstream 3471 true Chr05: 96958-100428 Glycine max
Glyma.05G001200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 96958-97957 Glycine max
Glyma.05G001200 2.0kb upstream 2.0kb upstream 4471 true Chr05: 97958-102428 Glycine max
Glyma.05G001200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 100429-102428 Glycine max
Glyma.05G001200 2.0kb downstream 2.0kb downstream 4471 true Chr05: 95958-100428 Glycine max
Glyma.05G001200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 95958-97957 Glycine max
Glyma.05G001200 5.0kb upstream 5.0kb upstream 7471 true Chr05: 97958-105428 Glycine max
Glyma.05G001200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 100429-105428 Glycine max
Glyma.05G001200 5.0kb downstream 5.0kb downstream 7471 true Chr05: 92958-100428 Glycine max
Glyma.05G001200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 92958-97957 Glycine max
Glyma.05G001200 10.0kb upstream 10.0kb upstream 12471 true Chr05: 97958-110428 Glycine max
Glyma.05G001200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 100429-110428 Glycine max
Glyma.05G001200 10.0kb downstream 10.0kb downstream 12471 true Chr05: 87958-100428 Glycine max
Glyma.05G001200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 87958-97957 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314348 5265 Fabidae View MSA
124068400 5270 Rosid View MSA
123751041 5271 Pentapetalae View MSA
122785811 5272 Eudicot View MSA
122046544 5273 Angiosperm View MSA
121344170 5274 Embryophyte View MSA
123424683 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.4899 0.0 42.9747   Low
cufflinks 15.9287 0.0 47.6557   Low
cufflinks 18.3365 0.0 55.4896    
cufflinks 26.6697 0.0 98.2881 High High
cufflinks 22.037 0.0 78.8487 High  
cufflinks 18.7532 0.0 65.4368    
cufflinks 29.175 0.0 93.7972 High High
cufflinks 17.544 0.0 61.2049    
cufflinks 23.0456 0.0 71.5323 High  
cufflinks 6.806        
cufflinks 8.59     High  
cufflinks 11.452     High High
cufflinks 9.045     High  
cufflinks 12.169     High High
cufflinks 6.187     High  
cufflinks 4.405       Low
cufflinks 6.393     High  
cufflinks 11.355     High High
cufflinks 6.742        
cufflinks 4.19       Low
cufflinks 8.771     High  
cufflinks 4.323       Low
cufflinks 4.123       Low
cufflinks 8.866     High  
cufflinks 4.545       Low
cufflinks 9.256     High  

0 Strain