Gene : Glyma.05G002400 G. max Wm82.a2.v1
Genomic Order:  24 Name:  ? Glyma.05G002400
Secondary Identifier:  ? PAC:30524509
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G002400 0.5kb upstream 0.5kb upstream 1667 true Chr05: 179717-181383 Glycine max
Glyma.05G002400 0.5kb upstream 0.5kb upstream 500 false Chr05: 179717-180216 Glycine max
Glyma.05G002400 0.5kb downstream 0.5kb downstream 1667 true Chr05: 180217-181883 Glycine max
Glyma.05G002400 0.5kb downstream 0.5kb downstream 500 false Chr05: 181384-181883 Glycine max
Glyma.05G002400 1.0kb upstream 1.0kb upstream 2167 true Chr05: 179217-181383 Glycine max
Glyma.05G002400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 179217-180216 Glycine max
Glyma.05G002400 1.0kb downstream 1.0kb downstream 2167 true Chr05: 180217-182383 Glycine max
Glyma.05G002400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 181384-182383 Glycine max
Glyma.05G002400 2.0kb upstream 2.0kb upstream 3167 true Chr05: 178217-181383 Glycine max
Glyma.05G002400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 178217-180216 Glycine max
Glyma.05G002400 2.0kb downstream 2.0kb downstream 3167 true Chr05: 180217-183383 Glycine max
Glyma.05G002400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 181384-183383 Glycine max
Glyma.05G002400 5.0kb upstream 5.0kb upstream 6167 true Chr05: 175217-181383 Glycine max
Glyma.05G002400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 175217-180216 Glycine max
Glyma.05G002400 5.0kb downstream 5.0kb downstream 6167 true Chr05: 180217-186383 Glycine max
Glyma.05G002400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 181384-186383 Glycine max
Glyma.05G002400 10.0kb upstream 10.0kb upstream 11167 true Chr05: 170217-181383 Glycine max
Glyma.05G002400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 170217-180216 Glycine max
Glyma.05G002400 10.0kb downstream 10.0kb downstream 11167 true Chr05: 180217-191383 Glycine max
Glyma.05G002400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 181384-191383 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304550 5265 Fabidae View MSA
124060553 5270 Rosid View MSA
123741817 5271 Pentapetalae View MSA
122786659 5272 Eudicot View MSA
122043183 5273 Angiosperm View MSA
121310085 5274 Embryophyte View MSA
123347672 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.3148 0.0 37.4084   High
cufflinks 10.0299 0.0 29.0772    
cufflinks 8.05672 0.0 24.1011    
cufflinks 6.37144 0.0 19.6363   Low
cufflinks 8.18975 0.0 24.3481    
cufflinks 8.79516 0.0 25.9568    
cufflinks 11.2809 0.0 32.2863    
cufflinks 11.7952 0.0 33.5074   High
cufflinks 8.01944 0.0 23.9381    
cufflinks 4.397        
cufflinks 3.968       Low
cufflinks 3.776       Low
cufflinks 3.457       Low
cufflinks 3.589       Low
cufflinks 4.035        
cufflinks 6.456       High
cufflinks 5.519        
cufflinks 4.211        
cufflinks 6.192        
cufflinks 5.961        
cufflinks 6.069     High  
cufflinks 6.733       High
cufflinks 7.192       High
cufflinks 5.163        
cufflinks 6.044        
cufflinks 5.548        

0 Strain