Gene : Glyma.05G003500 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG1833 - Nuclear pore complex, gp210 component Genomic Order:  35
Name:  ? Glyma.05G003500 Secondary Identifier:  ? PAC:30524687
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G003500 0.5kb upstream 0.5kb upstream 34604 true Chr05: 243074-277677 Glycine max
Glyma.05G003500 0.5kb upstream 0.5kb upstream 500 false Chr05: 277178-277677 Glycine max
Glyma.05G003500 0.5kb downstream 0.5kb downstream 34604 true Chr05: 242574-277177 Glycine max
Glyma.05G003500 0.5kb downstream 0.5kb downstream 500 false Chr05: 242574-243073 Glycine max
Glyma.05G003500 1.0kb upstream 1.0kb upstream 35104 true Chr05: 243074-278177 Glycine max
Glyma.05G003500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 277178-278177 Glycine max
Glyma.05G003500 1.0kb downstream 1.0kb downstream 35104 true Chr05: 242074-277177 Glycine max
Glyma.05G003500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 242074-243073 Glycine max
Glyma.05G003500 2.0kb upstream 2.0kb upstream 36104 true Chr05: 243074-279177 Glycine max
Glyma.05G003500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 277178-279177 Glycine max
Glyma.05G003500 2.0kb downstream 2.0kb downstream 36104 true Chr05: 241074-277177 Glycine max
Glyma.05G003500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 241074-243073 Glycine max
Glyma.05G003500 5.0kb upstream 5.0kb upstream 39104 true Chr05: 243074-282177 Glycine max
Glyma.05G003500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 277178-282177 Glycine max
Glyma.05G003500 5.0kb downstream 5.0kb downstream 39104 true Chr05: 238074-277177 Glycine max
Glyma.05G003500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 238074-243073 Glycine max
Glyma.05G003500 10.0kb upstream 10.0kb upstream 44104 true Chr05: 243074-287177 Glycine max
Glyma.05G003500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 277178-287177 Glycine max
Glyma.05G003500 10.0kb downstream 10.0kb downstream 44104 true Chr05: 233074-277177 Glycine max
Glyma.05G003500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 233074-243073 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302870 5265 Fabidae View MSA
124050751 5270 Rosid View MSA
123750800 5271 Pentapetalae View MSA
122787640 5272 Eudicot View MSA
122045642 5273 Angiosperm View MSA
121344134 5274 Embryophyte View MSA
123379983 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.12089 0.0 11.0159    
cufflinks 8.514 0.0 23.0713    
cufflinks 4.25887 0.0 11.3698    
cufflinks 8.93208 0.0 24.2717    
cufflinks 6.57336 0.0 17.5973    
cufflinks 2.0886 0.0 5.78552   Low
cufflinks 14.0067 0.0 39.4962   High
cufflinks 4.96946 0.0 13.2579    
cufflinks 5.99671 0.0 16.0286    
cufflinks 1.346        
cufflinks 0.135       Low
cufflinks 1.785        
cufflinks 1.233        
cufflinks 1.666        
cufflinks 0.41        
cufflinks 1.023        
cufflinks 0.744        
cufflinks 2.518       High
cufflinks 2.721       High
cufflinks 0.968        
cufflinks 0.265       Low
cufflinks 1.058        
cufflinks 1.171        
cufflinks 0.191       Low
cufflinks 0.969        
cufflinks 0.598        

0 Strain