Gene : Glyma.05G003800 G. max Wm82.a2.v1
Defline:  (1 of 62) PF02485 - Core-2/I-Branching enzyme (Branch) Genomic Order:  38
Name:  ? Glyma.05G003800 Secondary Identifier:  ? PAC:30525892
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G003800 0.5kb upstream 0.5kb upstream 7226 true Chr05: 293756-300981 Glycine max
Glyma.05G003800 0.5kb upstream 0.5kb upstream 500 false Chr05: 293756-294255 Glycine max
Glyma.05G003800 0.5kb downstream 0.5kb downstream 7226 true Chr05: 294256-301481 Glycine max
Glyma.05G003800 0.5kb downstream 0.5kb downstream 500 false Chr05: 300982-301481 Glycine max
Glyma.05G003800 1.0kb upstream 1.0kb upstream 7726 true Chr05: 293256-300981 Glycine max
Glyma.05G003800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 293256-294255 Glycine max
Glyma.05G003800 1.0kb downstream 1.0kb downstream 7726 true Chr05: 294256-301981 Glycine max
Glyma.05G003800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 300982-301981 Glycine max
Glyma.05G003800 2.0kb upstream 2.0kb upstream 8726 true Chr05: 292256-300981 Glycine max
Glyma.05G003800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 292256-294255 Glycine max
Glyma.05G003800 2.0kb downstream 2.0kb downstream 8726 true Chr05: 294256-302981 Glycine max
Glyma.05G003800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 300982-302981 Glycine max
Glyma.05G003800 5.0kb upstream 5.0kb upstream 11726 true Chr05: 289256-300981 Glycine max
Glyma.05G003800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 289256-294255 Glycine max
Glyma.05G003800 5.0kb downstream 5.0kb downstream 11726 true Chr05: 294256-305981 Glycine max
Glyma.05G003800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 300982-305981 Glycine max
Glyma.05G003800 10.0kb upstream 10.0kb upstream 16726 true Chr05: 284256-300981 Glycine max
Glyma.05G003800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 284256-294255 Glycine max
Glyma.05G003800 10.0kb downstream 10.0kb downstream 16726 true Chr05: 294256-310981 Glycine max
Glyma.05G003800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 300982-310981 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307563 5265 Fabidae View MSA
124066667 5270 Rosid View MSA
123753722 5271 Pentapetalae View MSA
122788010 5272 Eudicot View MSA
122051448 5273 Angiosperm View MSA
121351490 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.53694 0.0 18.0359    
cufflinks 6.47012 0.0 17.8509   Low
cufflinks 12.7025 0.0 33.9111    
cufflinks 11.2218 0.0 30.0325    
cufflinks 8.66391 0.0 23.4581    
cufflinks 13.9689 0.0 37.2709   High
cufflinks 5.76581 0.0 16.0951   Low
cufflinks 14.5178 0.0 38.7318   High
cufflinks 8.01459 0.0 21.7767    
cufflinks 3.894       High
cufflinks 0.744       Low
cufflinks 4.224       High
cufflinks 3.887       High
cufflinks 4.527       High
cufflinks 0.677       Low
cufflinks 2.267        
cufflinks 0.924       Low
cufflinks 5.149       High
cufflinks 2.658        
cufflinks 1.944        
cufflinks 1.088        
cufflinks 2.377        
cufflinks 1.744        
cufflinks 1.566        
cufflinks 2.043        
cufflinks 1.24        

0 Strain