Gene : Glyma.05G004000 G. max Wm82.a2.v1
Defline:  (1 of 6) PF07223 - Protein of unknown function (DUF1421) (DUF1421) Genomic Order:  40
Name:  ? Glyma.05G004000 Secondary Identifier:  ? PAC:30524889
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G004000 0.5kb upstream 0.5kb upstream 5579 true Chr05: 319381-324959 Glycine max
Glyma.05G004000 0.5kb upstream 0.5kb upstream 500 false Chr05: 319381-319880 Glycine max
Glyma.05G004000 0.5kb downstream 0.5kb downstream 5579 true Chr05: 319881-325459 Glycine max
Glyma.05G004000 0.5kb downstream 0.5kb downstream 500 false Chr05: 324960-325459 Glycine max
Glyma.05G004000 1.0kb upstream 1.0kb upstream 6079 true Chr05: 318881-324959 Glycine max
Glyma.05G004000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 318881-319880 Glycine max
Glyma.05G004000 1.0kb downstream 1.0kb downstream 6079 true Chr05: 319881-325959 Glycine max
Glyma.05G004000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 324960-325959 Glycine max
Glyma.05G004000 2.0kb upstream 2.0kb upstream 7079 true Chr05: 317881-324959 Glycine max
Glyma.05G004000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 317881-319880 Glycine max
Glyma.05G004000 2.0kb downstream 2.0kb downstream 7079 true Chr05: 319881-326959 Glycine max
Glyma.05G004000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 324960-326959 Glycine max
Glyma.05G004000 5.0kb upstream 5.0kb upstream 10079 true Chr05: 314881-324959 Glycine max
Glyma.05G004000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 314881-319880 Glycine max
Glyma.05G004000 5.0kb downstream 5.0kb downstream 10079 true Chr05: 319881-329959 Glycine max
Glyma.05G004000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 324960-329959 Glycine max
Glyma.05G004000 10.0kb upstream 10.0kb upstream 15079 true Chr05: 309881-324959 Glycine max
Glyma.05G004000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 309881-319880 Glycine max
Glyma.05G004000 10.0kb downstream 10.0kb downstream 15079 true Chr05: 319881-334959 Glycine max
Glyma.05G004000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 324960-334959 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307993 5265 Fabidae View MSA
124072607 5270 Rosid View MSA
123737243 5271 Pentapetalae View MSA
122792477 5272 Eudicot View MSA
122050948 5273 Angiosperm View MSA
121350556 5274 Embryophyte View MSA
123427524 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.2799 0.0 46.1614    
cufflinks 13.6169 0.0 36.6492   Low
cufflinks 20.3195 0.0 54.2116 High  
cufflinks 23.7925 0.0 63.5663 High High
cufflinks 20.9688 0.0 55.9582 High  
cufflinks 13.7632 0.0 36.9916   Low
cufflinks 19.5643 0.0 52.1956    
cufflinks 19.1968 0.0 51.2158    
cufflinks 15.7723 0.0 42.2014    
cufflinks 4.45        
cufflinks 4.572        
cufflinks 5.65       High
cufflinks 5.039        
cufflinks 4.66        
cufflinks 4.69        
cufflinks 4.865        
cufflinks 2.82       Low
cufflinks 4.804        
cufflinks 5.506        
cufflinks 4.932        
cufflinks 5.375        
cufflinks 4.709        
cufflinks 4.564        
cufflinks 5.599        
cufflinks 4.864        
cufflinks 5.391        

0 Strain