Gene : Glyma.04G253000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10972:SF67 - OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1D Genomic Order:  2530
Name:  ? Glyma.04G253000 Secondary Identifier:  ? PAC:30489262
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G253000 0.5kb upstream 0.5kb upstream 6670 true Chr04: 51963709-51970378 Glycine max
Glyma.04G253000 0.5kb upstream 0.5kb upstream 500 false Chr04: 51963709-51964208 Glycine max
Glyma.04G253000 0.5kb downstream 0.5kb downstream 6670 true Chr04: 51964209-51970878 Glycine max
Glyma.04G253000 0.5kb downstream 0.5kb downstream 500 false Chr04: 51970379-51970878 Glycine max
Glyma.04G253000 1.0kb upstream 1.0kb upstream 7170 true Chr04: 51963209-51970378 Glycine max
Glyma.04G253000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 51963209-51964208 Glycine max
Glyma.04G253000 1.0kb downstream 1.0kb downstream 7170 true Chr04: 51964209-51971378 Glycine max
Glyma.04G253000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 51970379-51971378 Glycine max
Glyma.04G253000 2.0kb upstream 2.0kb upstream 8170 true Chr04: 51962209-51970378 Glycine max
Glyma.04G253000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 51962209-51964208 Glycine max
Glyma.04G253000 2.0kb downstream 2.0kb downstream 8170 true Chr04: 51964209-51972378 Glycine max
Glyma.04G253000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 51970379-51972378 Glycine max
Glyma.04G253000 5.0kb upstream 5.0kb upstream 11170 true Chr04: 51959209-51970378 Glycine max
Glyma.04G253000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 51959209-51964208 Glycine max
Glyma.04G253000 5.0kb downstream 5.0kb downstream 11170 true Chr04: 51964209-51975378 Glycine max
Glyma.04G253000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 51970379-51975378 Glycine max
Glyma.04G253000 10.0kb upstream 10.0kb upstream 16170 true Chr04: 51954209-51970378 Glycine max
Glyma.04G253000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 51954209-51964208 Glycine max
Glyma.04G253000 10.0kb downstream 10.0kb downstream 16170 true Chr04: 51964209-51980378 Glycine max
Glyma.04G253000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 51970379-51980378 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041393 5273 Angiosperm View MSA
122302248 5265 Fabidae View MSA
124062971 5270 Rosid View MSA
123750665 5271 Pentapetalae View MSA
122795598 5272 Eudicot View MSA
121348669 5274 Embryophyte View MSA
123428535 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.60689 0.0 10.0349    
cufflinks 3.03662 0.0 8.61778   Low
cufflinks 11.0036 0.0 29.406   High
cufflinks 6.42877 0.0 17.2561    
cufflinks 5.81096 0.0 15.6408    
cufflinks 5.24318 0.0 14.1919    
cufflinks 3.11189 0.0 8.79167   Low
cufflinks 6.30148 0.0 16.9339    
cufflinks 6.3819 0.0 17.1329    
cufflinks 3.36        
cufflinks 6.224     High  
cufflinks 5.763        
cufflinks 4.147        
cufflinks 3.315        
cufflinks 10.562     High High
cufflinks 1.547       Low
cufflinks 5.539        
cufflinks 2.879        
cufflinks 2.261        
cufflinks 1.706       Low
cufflinks 4.491        
cufflinks 1.965        
cufflinks 1.793       Low
cufflinks 6.067        
cufflinks 1.403       Low
cufflinks 5.744        

0 Strain