Gene : Glyma.04G254900 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR10073:SF40 - DNA MISMATCH REPAIR PROTEIN MLH1 Genomic Order:  2549
Name:  ? Glyma.04G254900 Secondary Identifier:  ? PAC:30490726
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G254900 0.5kb upstream 0.5kb upstream 15241 true Chr04: 52146939-52162179 Glycine max
Glyma.04G254900 0.5kb upstream 0.5kb upstream 500 false Chr04: 52146939-52147438 Glycine max
Glyma.04G254900 0.5kb downstream 0.5kb downstream 15241 true Chr04: 52147439-52162679 Glycine max
Glyma.04G254900 0.5kb downstream 0.5kb downstream 500 false Chr04: 52162180-52162679 Glycine max
Glyma.04G254900 1.0kb upstream 1.0kb upstream 15741 true Chr04: 52146439-52162179 Glycine max
Glyma.04G254900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 52146439-52147438 Glycine max
Glyma.04G254900 1.0kb downstream 1.0kb downstream 15741 true Chr04: 52147439-52163179 Glycine max
Glyma.04G254900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 52162180-52163179 Glycine max
Glyma.04G254900 2.0kb upstream 2.0kb upstream 16741 true Chr04: 52145439-52162179 Glycine max
Glyma.04G254900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 52145439-52147438 Glycine max
Glyma.04G254900 2.0kb downstream 2.0kb downstream 16741 true Chr04: 52147439-52164179 Glycine max
Glyma.04G254900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 52162180-52164179 Glycine max
Glyma.04G254900 5.0kb upstream 5.0kb upstream 19741 true Chr04: 52142439-52162179 Glycine max
Glyma.04G254900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 52142439-52147438 Glycine max
Glyma.04G254900 5.0kb downstream 5.0kb downstream 19741 true Chr04: 52147439-52167179 Glycine max
Glyma.04G254900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 52162180-52167179 Glycine max
Glyma.04G254900 10.0kb upstream 10.0kb upstream 24741 true Chr04: 52137439-52162179 Glycine max
Glyma.04G254900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 52137439-52147438 Glycine max
Glyma.04G254900 10.0kb downstream 10.0kb downstream 24741 true Chr04: 52147439-52172179 Glycine max
Glyma.04G254900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 52162180-52172179 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300480 5265 Fabidae View MSA
124050491 5270 Rosid View MSA
123746957 5271 Pentapetalae View MSA
122790973 5272 Eudicot View MSA
122045945 5273 Angiosperm View MSA
121345216 5274 Embryophyte View MSA
123426273 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.84827 0.0 5.85069    
cufflinks 3.68908 0.0 10.6211   High
cufflinks 1.40888 0.0 4.62296   Low
cufflinks 2.09792 0.0 6.51814    
cufflinks 3.35181 0.0 9.75987    
cufflinks 1.89993 0.0 5.98423    
cufflinks 2.79356 0.0 8.3506    
cufflinks 2.58695 0.0 7.79455    
cufflinks 3.59444 0.0 10.3717   High
cufflinks 0.406        
cufflinks 0.438        
cufflinks 0.392       Low
cufflinks 0.663        
cufflinks 0.857       High
cufflinks 0.769       High
cufflinks 0.533        
cufflinks 0.527        
cufflinks 0.463        
cufflinks 0.967       High
cufflinks 0.348       Low
cufflinks 0.483        
cufflinks 0.467        
cufflinks 0.785       High
cufflinks 0.535        
cufflinks 0.475        
cufflinks 0.48        

0 Strain