Gene : Glyma.05G020800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10202:SF13 - PRESENILIN-2 Genomic Order:  208
Name:  ? Glyma.05G020800 Secondary Identifier:  ? PAC:30526497
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G020800 0.5kb upstream 0.5kb upstream 2387 true Chr05: 1850072-1852458 Glycine max
Glyma.05G020800 0.5kb upstream 0.5kb upstream 500 false Chr05: 1851959-1852458 Glycine max
Glyma.05G020800 0.5kb downstream 0.5kb downstream 2387 true Chr05: 1849572-1851958 Glycine max
Glyma.05G020800 0.5kb downstream 0.5kb downstream 500 false Chr05: 1849572-1850071 Glycine max
Glyma.05G020800 1.0kb upstream 1.0kb upstream 2887 true Chr05: 1850072-1852958 Glycine max
Glyma.05G020800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1851959-1852958 Glycine max
Glyma.05G020800 1.0kb downstream 1.0kb downstream 2887 true Chr05: 1849072-1851958 Glycine max
Glyma.05G020800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1849072-1850071 Glycine max
Glyma.05G020800 2.0kb upstream 2.0kb upstream 3887 true Chr05: 1850072-1853958 Glycine max
Glyma.05G020800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1851959-1853958 Glycine max
Glyma.05G020800 2.0kb downstream 2.0kb downstream 3887 true Chr05: 1848072-1851958 Glycine max
Glyma.05G020800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1848072-1850071 Glycine max
Glyma.05G020800 5.0kb upstream 5.0kb upstream 6887 true Chr05: 1850072-1856958 Glycine max
Glyma.05G020800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1851959-1856958 Glycine max
Glyma.05G020800 5.0kb downstream 5.0kb downstream 6887 true Chr05: 1845072-1851958 Glycine max
Glyma.05G020800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1845072-1850071 Glycine max
Glyma.05G020800 10.0kb upstream 10.0kb upstream 11887 true Chr05: 1850072-1861958 Glycine max
Glyma.05G020800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1851959-1861958 Glycine max
Glyma.05G020800 10.0kb downstream 10.0kb downstream 11887 true Chr05: 1840072-1851958 Glycine max
Glyma.05G020800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1840072-1850071 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299279 5265 Fabidae View MSA
124063592 5270 Rosid View MSA
123748546 5271 Pentapetalae View MSA
122790840 5272 Eudicot View MSA
122049657 5273 Angiosperm View MSA
121347498 5274 Embryophyte View MSA
123424512 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.9888 0.0 14.532    
cufflinks 5.0243 0.0 14.6289    
cufflinks 2.53454 0.0 8.10327   Low
cufflinks 3.38669 0.0 10.3912    
cufflinks 4.86844 0.0 14.1879    
cufflinks 5.9889 0.0 17.0224   High
cufflinks 3.97836 0.0 11.9148    
cufflinks 4.31697 0.0 12.814    
cufflinks 4.32091 0.0 12.7983    
cufflinks 2.824        
cufflinks 1.537       Low
cufflinks 3.023        
cufflinks 4.118       High
cufflinks 5.143       High
cufflinks 2.114        
cufflinks 3.236        
cufflinks 1.82       Low
cufflinks 3.117        
cufflinks 4.295       High
cufflinks 3.21        
cufflinks 1.735       Low
cufflinks 3.051        
cufflinks 2.569        
cufflinks 2.203        
cufflinks 3.071        
cufflinks 2.4        

0 Strain