Gene : Glyma.05G021100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11972//PTHR11972:SF76 - NADPH OXIDASE Genomic Order:  211
Name:  ? Glyma.05G021100 Secondary Identifier:  ? PAC:30524307
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G021100 0.5kb upstream 0.5kb upstream 7275 true Chr05: 1871404-1878678 Glycine max
Glyma.05G021100 0.5kb upstream 0.5kb upstream 500 false Chr05: 1871404-1871903 Glycine max
Glyma.05G021100 0.5kb downstream 0.5kb downstream 7275 true Chr05: 1871904-1879178 Glycine max
Glyma.05G021100 0.5kb downstream 0.5kb downstream 500 false Chr05: 1878679-1879178 Glycine max
Glyma.05G021100 1.0kb upstream 1.0kb upstream 7775 true Chr05: 1870904-1878678 Glycine max
Glyma.05G021100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1870904-1871903 Glycine max
Glyma.05G021100 1.0kb downstream 1.0kb downstream 7775 true Chr05: 1871904-1879678 Glycine max
Glyma.05G021100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1878679-1879678 Glycine max
Glyma.05G021100 2.0kb upstream 2.0kb upstream 8775 true Chr05: 1869904-1878678 Glycine max
Glyma.05G021100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1869904-1871903 Glycine max
Glyma.05G021100 2.0kb downstream 2.0kb downstream 8775 true Chr05: 1871904-1880678 Glycine max
Glyma.05G021100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1878679-1880678 Glycine max
Glyma.05G021100 5.0kb upstream 5.0kb upstream 11775 true Chr05: 1866904-1878678 Glycine max
Glyma.05G021100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1866904-1871903 Glycine max
Glyma.05G021100 5.0kb downstream 5.0kb downstream 11775 true Chr05: 1871904-1883678 Glycine max
Glyma.05G021100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1878679-1883678 Glycine max
Glyma.05G021100 10.0kb upstream 10.0kb upstream 16775 true Chr05: 1861904-1878678 Glycine max
Glyma.05G021100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1861904-1871903 Glycine max
Glyma.05G021100 10.0kb downstream 10.0kb downstream 16775 true Chr05: 1871904-1888678 Glycine max
Glyma.05G021100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1878679-1888678 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300900 5265 Fabidae View MSA
124037612 5270 Rosid View MSA
123743379 5271 Pentapetalae View MSA
122794303 5272 Eudicot View MSA
122049600 5273 Angiosperm View MSA
121311497 5274 Embryophyte View MSA
123427915 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.07992 0.0 5.19492    
cufflinks 0.188184 0.0 1.21966 Low Low
cufflinks 0.588069 0.0 3.3273    
cufflinks 1.16975 0.0 5.73092    
cufflinks 9.76812 0.0 28.1928   High
cufflinks 4.37888 0.0 15.7184    
cufflinks 10.7263 0.0 34.5711   High
cufflinks 5.23961 0.0 18.8875    
cufflinks 5.40417 0.0 16.9563    
cufflinks 1.224       High
cufflinks 0.252        
cufflinks 0.189        
cufflinks 4.267       High
cufflinks 2.029       High
cufflinks 0.159        
cufflinks 0.313        
cufflinks 0.653        
cufflinks 0.63        
cufflinks 0.057     Low Low
cufflinks 0.094     Low  
cufflinks 0.476        
cufflinks 0.1        
cufflinks 0.028     Low Low
cufflinks 0.255        
cufflinks 0.223        
cufflinks 0.773        

0 Strain