Gene : Glyma.05G021400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10625:SF102 - HISTONE DEACETYLASE 10 Genomic Order:  214
Name:  ? Glyma.05G021400 Secondary Identifier:  ? PAC:30524605
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G021400 0.5kb upstream 0.5kb upstream 7006 true Chr05: 1890928-1897933 Glycine max
Glyma.05G021400 0.5kb upstream 0.5kb upstream 500 false Chr05: 1897434-1897933 Glycine max
Glyma.05G021400 0.5kb downstream 0.5kb downstream 7006 true Chr05: 1890428-1897433 Glycine max
Glyma.05G021400 0.5kb downstream 0.5kb downstream 500 false Chr05: 1890428-1890927 Glycine max
Glyma.05G021400 1.0kb upstream 1.0kb upstream 7506 true Chr05: 1890928-1898433 Glycine max
Glyma.05G021400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1897434-1898433 Glycine max
Glyma.05G021400 1.0kb downstream 1.0kb downstream 7506 true Chr05: 1889928-1897433 Glycine max
Glyma.05G021400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1889928-1890927 Glycine max
Glyma.05G021400 2.0kb upstream 2.0kb upstream 8506 true Chr05: 1890928-1899433 Glycine max
Glyma.05G021400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1897434-1899433 Glycine max
Glyma.05G021400 2.0kb downstream 2.0kb downstream 8506 true Chr05: 1888928-1897433 Glycine max
Glyma.05G021400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1888928-1890927 Glycine max
Glyma.05G021400 5.0kb upstream 5.0kb upstream 11506 true Chr05: 1890928-1902433 Glycine max
Glyma.05G021400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1897434-1902433 Glycine max
Glyma.05G021400 5.0kb downstream 5.0kb downstream 11506 true Chr05: 1885928-1897433 Glycine max
Glyma.05G021400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1885928-1890927 Glycine max
Glyma.05G021400 10.0kb upstream 10.0kb upstream 16506 true Chr05: 1890928-1907433 Glycine max
Glyma.05G021400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1897434-1907433 Glycine max
Glyma.05G021400 10.0kb downstream 10.0kb downstream 16506 true Chr05: 1880928-1897433 Glycine max
Glyma.05G021400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1880928-1890927 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310763 5265 Fabidae View MSA
124067905 5270 Rosid View MSA
123752884 5271 Pentapetalae View MSA
122793476 5272 Eudicot View MSA
122051091 5273 Angiosperm View MSA
121349302 5274 Embryophyte View MSA
123428156 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.8275 0.0 36.9122    
cufflinks 15.2444 0.0 40.7562    
cufflinks 19.1793 0.0 51.7449   High
cufflinks 13.7095 0.0 36.5966    
cufflinks 13.2446 0.0 35.3421    
cufflinks 16.7507 0.0 44.9016    
cufflinks 12.4289 0.0 33.1589   Low
cufflinks 12.8067 0.0 34.1682    
cufflinks 16.3137 0.0 43.6936    
cufflinks 4.748        
cufflinks 3.13       Low
cufflinks 6.992        
cufflinks 5.549        
cufflinks 5.714        
cufflinks 4.026        
cufflinks 7.433     High High
cufflinks 3.892       Low
cufflinks 6.176        
cufflinks 6.944        
cufflinks 6.567        
cufflinks 3.521       Low
cufflinks 7.161       High
cufflinks 6.522        
cufflinks 3.81       Low
cufflinks 6.309        
cufflinks 4.654        

0 Strain