Gene : Glyma.05G016700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10285:SF76 - URIDINE KINASE Genomic Order:  167
Name:  ? Glyma.05G016700 Secondary Identifier:  ? PAC:30526403
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7193 Glycine max pathologic  
Gmax PWY-7196 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G016700 0.5kb upstream 0.5kb upstream 9557 true Chr05: 1479971-1489527 Glycine max
Glyma.05G016700 0.5kb upstream 0.5kb upstream 500 false Chr05: 1489028-1489527 Glycine max
Glyma.05G016700 0.5kb downstream 0.5kb downstream 9557 true Chr05: 1479471-1489027 Glycine max
Glyma.05G016700 0.5kb downstream 0.5kb downstream 500 false Chr05: 1479471-1479970 Glycine max
Glyma.05G016700 1.0kb upstream 1.0kb upstream 10057 true Chr05: 1479971-1490027 Glycine max
Glyma.05G016700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1489028-1490027 Glycine max
Glyma.05G016700 1.0kb downstream 1.0kb downstream 10057 true Chr05: 1478971-1489027 Glycine max
Glyma.05G016700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1478971-1479970 Glycine max
Glyma.05G016700 2.0kb upstream 2.0kb upstream 11057 true Chr05: 1479971-1491027 Glycine max
Glyma.05G016700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1489028-1491027 Glycine max
Glyma.05G016700 2.0kb downstream 2.0kb downstream 11057 true Chr05: 1477971-1489027 Glycine max
Glyma.05G016700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1477971-1479970 Glycine max
Glyma.05G016700 5.0kb upstream 5.0kb upstream 14057 true Chr05: 1479971-1494027 Glycine max
Glyma.05G016700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1489028-1494027 Glycine max
Glyma.05G016700 5.0kb downstream 5.0kb downstream 14057 true Chr05: 1474971-1489027 Glycine max
Glyma.05G016700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1474971-1479970 Glycine max
Glyma.05G016700 10.0kb upstream 10.0kb upstream 19057 true Chr05: 1479971-1499027 Glycine max
Glyma.05G016700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1489028-1499027 Glycine max
Glyma.05G016700 10.0kb downstream 10.0kb downstream 19057 true Chr05: 1469971-1489027 Glycine max
Glyma.05G016700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1469971-1479970 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300917 5265 Fabidae View MSA
124070976 5270 Rosid View MSA
123746405 5271 Pentapetalae View MSA
122786866 5272 Eudicot View MSA
122043584 5273 Angiosperm View MSA
121351427 5274 Embryophyte View MSA
123427517 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.4845 0.0 99.1226   High
cufflinks 5.1015 0.0 22.3829    
cufflinks 19.9512 0.0 86.9251   High
cufflinks 6.31188 0.0 26.4841    
cufflinks 2.73115 0.0 14.3242   Low
cufflinks 2.115 0.0 10.5432   Low
cufflinks 6.28438 0.0 29.5177    
cufflinks 7.04795 0.0 28.6457    
cufflinks 3.53003 0.0 16.8798    
cufflinks 0.229        
cufflinks 0.239        
cufflinks 0.655       High
cufflinks 0.14       Low
cufflinks 0.073       Low
cufflinks 0.121       Low
cufflinks 0.394        
cufflinks 0.256        
cufflinks 0.482        
cufflinks 0.31        
cufflinks 0.618       High
cufflinks 0.213        
cufflinks 0.625       High
cufflinks 0.374        
cufflinks 0.314        
cufflinks 0.488        
cufflinks 0.257        

0 Strain