Gene : Glyma.05G016800 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR23105//PTHR23105:SF61 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER Genomic Order:  168
Name:  ? Glyma.05G016800 Secondary Identifier:  ? PAC:30526593
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G016800 0.5kb upstream 0.5kb upstream 2776 true Chr05: 1490761-1493536 Glycine max
Glyma.05G016800 0.5kb upstream 0.5kb upstream 500 false Chr05: 1490761-1491260 Glycine max
Glyma.05G016800 0.5kb downstream 0.5kb downstream 2776 true Chr05: 1491261-1494036 Glycine max
Glyma.05G016800 0.5kb downstream 0.5kb downstream 500 false Chr05: 1493537-1494036 Glycine max
Glyma.05G016800 1.0kb upstream 1.0kb upstream 3276 true Chr05: 1490261-1493536 Glycine max
Glyma.05G016800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1490261-1491260 Glycine max
Glyma.05G016800 1.0kb downstream 1.0kb downstream 3276 true Chr05: 1491261-1494536 Glycine max
Glyma.05G016800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1493537-1494536 Glycine max
Glyma.05G016800 2.0kb upstream 2.0kb upstream 4276 true Chr05: 1489261-1493536 Glycine max
Glyma.05G016800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1489261-1491260 Glycine max
Glyma.05G016800 2.0kb downstream 2.0kb downstream 4276 true Chr05: 1491261-1495536 Glycine max
Glyma.05G016800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1493537-1495536 Glycine max
Glyma.05G016800 5.0kb upstream 5.0kb upstream 7276 true Chr05: 1486261-1493536 Glycine max
Glyma.05G016800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1486261-1491260 Glycine max
Glyma.05G016800 5.0kb downstream 5.0kb downstream 7276 true Chr05: 1491261-1498536 Glycine max
Glyma.05G016800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1493537-1498536 Glycine max
Glyma.05G016800 10.0kb upstream 10.0kb upstream 12276 true Chr05: 1481261-1493536 Glycine max
Glyma.05G016800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1481261-1491260 Glycine max
Glyma.05G016800 10.0kb downstream 10.0kb downstream 12276 true Chr05: 1491261-1503536 Glycine max
Glyma.05G016800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1493537-1503536 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040888 5273 Angiosperm View MSA
122250075 5265 Fabidae View MSA
123993393 5270 Rosid View MSA
123568177 5271 Pentapetalae View MSA
122602924 5272 Eudicot View MSA
121345742 5274 Embryophyte View MSA
123425979 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.0403 0.0 48.5592   High
cufflinks 8.30279 0.0 23.7775    
cufflinks 4.52052 0.0 13.9664   Low
cufflinks 9.45091 0.0 26.6371    
cufflinks 6.95965 0.0 20.3879    
cufflinks 4.94638 0.0 15.1723   Low
cufflinks 21.8107 0.0 58.3476 High High
cufflinks 11.7548 0.0 32.4658    
cufflinks 5.47804 0.0 16.5544    
cufflinks 2.668       High
cufflinks 0.762       Low
cufflinks 2.029        
cufflinks 1.708        
cufflinks 2.105        
cufflinks 0.396       Low
cufflinks 1.496        
cufflinks 1.352        
cufflinks 2.617       High
cufflinks 2.242       High
cufflinks 1.229        
cufflinks 0.794        
cufflinks 1.283        
cufflinks 1.615        
cufflinks 0.87        
cufflinks 1.273        
cufflinks 0.755       Low

0 Strain