Gene : Glyma.05G017200 G. max Wm82.a2.v1
Genomic Order:  172 Name:  ? Glyma.05G017200
Secondary Identifier:  ? PAC:30527043
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G017200 0.5kb upstream 0.5kb upstream 2073 true Chr05: 1512856-1514928 Glycine max
Glyma.05G017200 0.5kb upstream 0.5kb upstream 500 false Chr05: 1512856-1513355 Glycine max
Glyma.05G017200 0.5kb downstream 0.5kb downstream 2073 true Chr05: 1513356-1515428 Glycine max
Glyma.05G017200 0.5kb downstream 0.5kb downstream 500 false Chr05: 1514929-1515428 Glycine max
Glyma.05G017200 1.0kb upstream 1.0kb upstream 2573 true Chr05: 1512356-1514928 Glycine max
Glyma.05G017200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1512356-1513355 Glycine max
Glyma.05G017200 1.0kb downstream 1.0kb downstream 2573 true Chr05: 1513356-1515928 Glycine max
Glyma.05G017200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1514929-1515928 Glycine max
Glyma.05G017200 2.0kb upstream 2.0kb upstream 3573 true Chr05: 1511356-1514928 Glycine max
Glyma.05G017200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1511356-1513355 Glycine max
Glyma.05G017200 2.0kb downstream 2.0kb downstream 3573 true Chr05: 1513356-1516928 Glycine max
Glyma.05G017200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1514929-1516928 Glycine max
Glyma.05G017200 5.0kb upstream 5.0kb upstream 6573 true Chr05: 1508356-1514928 Glycine max
Glyma.05G017200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1508356-1513355 Glycine max
Glyma.05G017200 5.0kb downstream 5.0kb downstream 6573 true Chr05: 1513356-1519928 Glycine max
Glyma.05G017200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1514929-1519928 Glycine max
Glyma.05G017200 10.0kb upstream 10.0kb upstream 11573 true Chr05: 1503356-1514928 Glycine max
Glyma.05G017200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1503356-1513355 Glycine max
Glyma.05G017200 10.0kb downstream 10.0kb downstream 11573 true Chr05: 1513356-1524928 Glycine max
Glyma.05G017200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1514929-1524928 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028773 5273 Angiosperm View MSA
122309542 5265 Fabidae View MSA
124062684 5270 Rosid View MSA
123745811 5271 Pentapetalae View MSA
122796444 5272 Eudicot View MSA
121298217 5274 Embryophyte View MSA
123336203 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.13788 0.0 1.05276 Low  
cufflinks 1.26964 0.0 5.6964    
cufflinks 32.7968 0.0 105.321 High High
cufflinks 0.0633154 0.0 0.262557 Low  
cufflinks 0.0340791 0.0 0.152949 Low  
cufflinks 0.110854 0.0 0.447746 Low  
cufflinks 0.123337 0.0 0.495235 Low  
cufflinks 0.0195844 0.0 0.101927 Low Low
cufflinks 0.542925 0.0 3.51065    
cufflinks 0.005     Low  
cufflinks 0.006     Low  
cufflinks 3.37       High
cufflinks 0.021     Low  
cufflinks 0.004     Low Low
cufflinks 0.012     Low  
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.284       High
cufflinks 1.288       High
cufflinks 0.042     Low  
cufflinks 0.007     Low  
cufflinks 0.025     Low  
cufflinks 0.021     Low  
cufflinks 0.007     Low  
cufflinks 0.049     Low  
cufflinks 0.044     Low  

0 Strain