Gene : Glyma.05G017900 G. max Wm82.a2.v1
Defline:  (1 of 83) PF10250 - GDP-fucose protein O-fucosyltransferase (O-FucT) Genomic Order:  179
Name:  ? Glyma.05G017900 Secondary Identifier:  ? PAC:30527668
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G017900 0.5kb upstream 0.5kb upstream 3977 true Chr05: 1576538-1580514 Glycine max
Glyma.05G017900 0.5kb upstream 0.5kb upstream 500 false Chr05: 1580015-1580514 Glycine max
Glyma.05G017900 0.5kb downstream 0.5kb downstream 3977 true Chr05: 1576038-1580014 Glycine max
Glyma.05G017900 0.5kb downstream 0.5kb downstream 500 false Chr05: 1576038-1576537 Glycine max
Glyma.05G017900 1.0kb upstream 1.0kb upstream 4477 true Chr05: 1576538-1581014 Glycine max
Glyma.05G017900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1580015-1581014 Glycine max
Glyma.05G017900 1.0kb downstream 1.0kb downstream 4477 true Chr05: 1575538-1580014 Glycine max
Glyma.05G017900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1575538-1576537 Glycine max
Glyma.05G017900 2.0kb upstream 2.0kb upstream 5477 true Chr05: 1576538-1582014 Glycine max
Glyma.05G017900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1580015-1582014 Glycine max
Glyma.05G017900 2.0kb downstream 2.0kb downstream 5477 true Chr05: 1574538-1580014 Glycine max
Glyma.05G017900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1574538-1576537 Glycine max
Glyma.05G017900 5.0kb upstream 5.0kb upstream 8477 true Chr05: 1576538-1585014 Glycine max
Glyma.05G017900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1580015-1585014 Glycine max
Glyma.05G017900 5.0kb downstream 5.0kb downstream 8477 true Chr05: 1571538-1580014 Glycine max
Glyma.05G017900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1571538-1576537 Glycine max
Glyma.05G017900 10.0kb upstream 10.0kb upstream 13477 true Chr05: 1576538-1590014 Glycine max
Glyma.05G017900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1580015-1590014 Glycine max
Glyma.05G017900 10.0kb downstream 10.0kb downstream 13477 true Chr05: 1566538-1580014 Glycine max
Glyma.05G017900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1566538-1576537 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310768 5265 Fabidae View MSA
124069771 5270 Rosid View MSA
123749174 5271 Pentapetalae View MSA
122786787 5272 Eudicot View MSA
122050382 5273 Angiosperm View MSA
121348832 5274 Embryophyte View MSA
123381034 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.95449 0.0 21.4226    
cufflinks 5.48347 0.0 15.1303    
cufflinks 2.67509 0.0 7.99576   Low
cufflinks 7.20099 0.0 19.4861    
cufflinks 8.44785 0.0 22.6906    
cufflinks 33.4399 0.0 94.3024 High High
cufflinks 7.35976 0.0 19.9003    
cufflinks 8.24069 0.0 22.1747    
cufflinks 9.40405 0.0 25.1809    
cufflinks 11.822     High  
cufflinks 33.497     High High
cufflinks 4.544       Low
cufflinks 13.122     High  
cufflinks 9.084     High  
cufflinks 64.19     High High
cufflinks 8.724     High  
cufflinks 19.538     High  
cufflinks 7.022        
cufflinks 6.125        
cufflinks 7.88     High  
cufflinks 66.519     High High
cufflinks 8.583     High  
cufflinks 8.753     High  
cufflinks 20.83     High  
cufflinks 7.64     High  
cufflinks 53.332     High High

0 Strain