Gene : Glyma.05G019700 G. max Wm82.a2.v1
Defline:  (1 of 6) PF13415//PF13418 - Galactose oxidase, central domain (Kelch_3) // Galactose oxidase, central domain (Kelch_4) Genomic Order:  197
Name:  ? Glyma.05G019700 Secondary Identifier:  ? PAC:30526468
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G019700 0.5kb upstream 0.5kb upstream 8711 true Chr05: 1747774-1756484 Glycine max
Glyma.05G019700 0.5kb upstream 0.5kb upstream 500 false Chr05: 1747774-1748273 Glycine max
Glyma.05G019700 0.5kb downstream 0.5kb downstream 8711 true Chr05: 1748274-1756984 Glycine max
Glyma.05G019700 0.5kb downstream 0.5kb downstream 500 false Chr05: 1756485-1756984 Glycine max
Glyma.05G019700 1.0kb upstream 1.0kb upstream 9211 true Chr05: 1747274-1756484 Glycine max
Glyma.05G019700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1747274-1748273 Glycine max
Glyma.05G019700 1.0kb downstream 1.0kb downstream 9211 true Chr05: 1748274-1757484 Glycine max
Glyma.05G019700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1756485-1757484 Glycine max
Glyma.05G019700 2.0kb upstream 2.0kb upstream 10211 true Chr05: 1746274-1756484 Glycine max
Glyma.05G019700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1746274-1748273 Glycine max
Glyma.05G019700 2.0kb downstream 2.0kb downstream 10211 true Chr05: 1748274-1758484 Glycine max
Glyma.05G019700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1756485-1758484 Glycine max
Glyma.05G019700 5.0kb upstream 5.0kb upstream 13211 true Chr05: 1743274-1756484 Glycine max
Glyma.05G019700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1743274-1748273 Glycine max
Glyma.05G019700 5.0kb downstream 5.0kb downstream 13211 true Chr05: 1748274-1761484 Glycine max
Glyma.05G019700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1756485-1761484 Glycine max
Glyma.05G019700 10.0kb upstream 10.0kb upstream 18211 true Chr05: 1738274-1756484 Glycine max
Glyma.05G019700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1738274-1748273 Glycine max
Glyma.05G019700 10.0kb downstream 10.0kb downstream 18211 true Chr05: 1748274-1766484 Glycine max
Glyma.05G019700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1756485-1766484 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307789 5265 Fabidae View MSA
124062622 5270 Rosid View MSA
123743479 5271 Pentapetalae View MSA
122792460 5272 Eudicot View MSA
122048338 5273 Angiosperm View MSA
121348105 5274 Embryophyte View MSA
123428379 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.83314 0.0 16.9222    
cufflinks 4.57791 0.0 27.0506    
cufflinks 3.03693 0.0 16.3677    
cufflinks 3.58495 0.0 21.0033    
cufflinks 3.34361 0.0 18.5497    
cufflinks 2.12416 0.0 11.4014   Low
cufflinks 7.53049 0.0 41.2624   High
cufflinks 2.5604 0.0 16.384    
cufflinks 3.75845 0.0 21.4149    
cufflinks 0.092     Low Low
cufflinks 0.122        
cufflinks 0.15        
cufflinks 0.134        
cufflinks 0.144        
cufflinks 0.089       Low
cufflinks 0.133        
cufflinks 0.091       Low
cufflinks 0.16        
cufflinks 0.197       High
cufflinks 0.201       High
cufflinks 0.119        
cufflinks 0.178       High
cufflinks 0.154        
cufflinks 0.143        
cufflinks 0.154        
cufflinks 0.084       Low

0 Strain