Gene : Glyma.05G012600 G. max Wm82.a2.v1
Defline:  (1 of 1) PF00332//PF06075 - Glycosyl hydrolases family 17 (Glyco_hydro_17) // Plant protein of unknown function (DUF936) (DUF936) Genomic Order:  126
Name:  ? Glyma.05G012600 Secondary Identifier:  ? PAC:30524269
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G012600 0.5kb upstream 0.5kb upstream 6359 true Chr05: 1179295-1185653 Glycine max
Glyma.05G012600 0.5kb upstream 0.5kb upstream 500 false Chr05: 1185154-1185653 Glycine max
Glyma.05G012600 0.5kb downstream 0.5kb downstream 6359 true Chr05: 1178795-1185153 Glycine max
Glyma.05G012600 0.5kb downstream 0.5kb downstream 500 false Chr05: 1178795-1179294 Glycine max
Glyma.05G012600 1.0kb upstream 1.0kb upstream 6859 true Chr05: 1179295-1186153 Glycine max
Glyma.05G012600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1185154-1186153 Glycine max
Glyma.05G012600 1.0kb downstream 1.0kb downstream 6859 true Chr05: 1178295-1185153 Glycine max
Glyma.05G012600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1178295-1179294 Glycine max
Glyma.05G012600 2.0kb upstream 2.0kb upstream 7859 true Chr05: 1179295-1187153 Glycine max
Glyma.05G012600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1185154-1187153 Glycine max
Glyma.05G012600 2.0kb downstream 2.0kb downstream 7859 true Chr05: 1177295-1185153 Glycine max
Glyma.05G012600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1177295-1179294 Glycine max
Glyma.05G012600 5.0kb upstream 5.0kb upstream 10859 true Chr05: 1179295-1190153 Glycine max
Glyma.05G012600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1185154-1190153 Glycine max
Glyma.05G012600 5.0kb downstream 5.0kb downstream 10859 true Chr05: 1174295-1185153 Glycine max
Glyma.05G012600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1174295-1179294 Glycine max
Glyma.05G012600 10.0kb upstream 10.0kb upstream 15859 true Chr05: 1179295-1195153 Glycine max
Glyma.05G012600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1185154-1195153 Glycine max
Glyma.05G012600 10.0kb downstream 10.0kb downstream 15859 true Chr05: 1169295-1185153 Glycine max
Glyma.05G012600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1169295-1179294 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301332 5265 Fabidae View MSA
124065665 5270 Rosid View MSA
123740189 5271 Pentapetalae View MSA
122787334 5272 Eudicot View MSA
122050076 5273 Angiosperm View MSA
121350805 5274 Embryophyte View MSA
123381891 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.672273 0.0 3.58678   Low
cufflinks 11.7751 0.0 39.7008   High
cufflinks 0.816129 0.0 3.2749   Low
cufflinks 6.88945 0.0 26.1982    
cufflinks 3.11877 0.0 12.5686    
cufflinks 1.90935 0.0 7.62792    
cufflinks 5.50909 0.0 19.4516    
cufflinks 3.66975 0.0 15.6238    
cufflinks 2.94886 0.0 12.1418    
cufflinks 0.683        
cufflinks 0.09        
cufflinks 0.411        
cufflinks 0.528        
cufflinks 0.568        
cufflinks 0.016     Low Low
cufflinks 1.233        
cufflinks 0.101        
cufflinks 0.475        
cufflinks 3.685       High
cufflinks 0.714        
cufflinks 0.071       Low
cufflinks 0.817        
cufflinks 0.929        
cufflinks 0.042     Low Low
cufflinks 0.92        
cufflinks 0.116        

0 Strain