Gene : Glyma.05G013900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23272:SF21 - BED ZINC FINGER AND HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN Genomic Order:  139
Name:  ? Glyma.05G013900 Secondary Identifier:  ? PAC:30527623
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G013900 0.5kb upstream 0.5kb upstream 4423 true Chr05: 1313611-1318033 Glycine max
Glyma.05G013900 0.5kb upstream 0.5kb upstream 500 false Chr05: 1317534-1318033 Glycine max
Glyma.05G013900 0.5kb downstream 0.5kb downstream 4423 true Chr05: 1313111-1317533 Glycine max
Glyma.05G013900 0.5kb downstream 0.5kb downstream 500 false Chr05: 1313111-1313610 Glycine max
Glyma.05G013900 1.0kb upstream 1.0kb upstream 4923 true Chr05: 1313611-1318533 Glycine max
Glyma.05G013900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1317534-1318533 Glycine max
Glyma.05G013900 1.0kb downstream 1.0kb downstream 4923 true Chr05: 1312611-1317533 Glycine max
Glyma.05G013900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1312611-1313610 Glycine max
Glyma.05G013900 2.0kb upstream 2.0kb upstream 5923 true Chr05: 1313611-1319533 Glycine max
Glyma.05G013900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1317534-1319533 Glycine max
Glyma.05G013900 2.0kb downstream 2.0kb downstream 5923 true Chr05: 1311611-1317533 Glycine max
Glyma.05G013900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1311611-1313610 Glycine max
Glyma.05G013900 5.0kb upstream 5.0kb upstream 8923 true Chr05: 1313611-1322533 Glycine max
Glyma.05G013900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1317534-1322533 Glycine max
Glyma.05G013900 5.0kb downstream 5.0kb downstream 8923 true Chr05: 1308611-1317533 Glycine max
Glyma.05G013900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1308611-1313610 Glycine max
Glyma.05G013900 10.0kb upstream 10.0kb upstream 13923 true Chr05: 1313611-1327533 Glycine max
Glyma.05G013900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1317534-1327533 Glycine max
Glyma.05G013900 10.0kb downstream 10.0kb downstream 13923 true Chr05: 1303611-1317533 Glycine max
Glyma.05G013900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1303611-1313610 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310055 5265 Fabidae View MSA
124071055 5270 Rosid View MSA
123752994 5271 Pentapetalae View MSA
122797909 5272 Eudicot View MSA
122048190 5273 Angiosperm View MSA
121350578 5274 Embryophyte View MSA
123381805 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.454237 0.0 2.06668   Low
cufflinks 0.973897 0.0 5.00261    
cufflinks 0.976886 0.0 4.94613    
cufflinks 0.581876 0.0 3.43415    
cufflinks 0.770733 0.0 4.18028    
cufflinks 0.885135 0.0 4.62438    
cufflinks 0.795333 0.0 4.28524    
cufflinks 0.528268 0.0 3.04454   Low
cufflinks 1.07476 0.0 4.0808   High
cufflinks 0.23        
cufflinks 0.226        
cufflinks 0.455       High
cufflinks 0.291        
cufflinks 0.284        
cufflinks 0.101       Low
cufflinks 0.261        
cufflinks 0.477       High
cufflinks 0.363        
cufflinks 0.31        
cufflinks 0.228        
cufflinks 0.127       Low
cufflinks 0.303        
cufflinks 0.263        
cufflinks 0.186        
cufflinks 0.236        
cufflinks 0.182        

0 Strain