Gene : Glyma.05G014400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15835:SF2 - NUCLEAR-INTERACTING PARTNER OF ALK Genomic Order:  144
Name:  ? Glyma.05G014400 Secondary Identifier:  ? PAC:30526063
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G014400 0.5kb upstream 0.5kb upstream 6896 true Chr05: 1341299-1348194 Glycine max
Glyma.05G014400 0.5kb upstream 0.5kb upstream 500 false Chr05: 1347695-1348194 Glycine max
Glyma.05G014400 0.5kb downstream 0.5kb downstream 6896 true Chr05: 1340799-1347694 Glycine max
Glyma.05G014400 0.5kb downstream 0.5kb downstream 500 false Chr05: 1340799-1341298 Glycine max
Glyma.05G014400 1.0kb upstream 1.0kb upstream 7396 true Chr05: 1341299-1348694 Glycine max
Glyma.05G014400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1347695-1348694 Glycine max
Glyma.05G014400 1.0kb downstream 1.0kb downstream 7396 true Chr05: 1340299-1347694 Glycine max
Glyma.05G014400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1340299-1341298 Glycine max
Glyma.05G014400 2.0kb upstream 2.0kb upstream 8396 true Chr05: 1341299-1349694 Glycine max
Glyma.05G014400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1347695-1349694 Glycine max
Glyma.05G014400 2.0kb downstream 2.0kb downstream 8396 true Chr05: 1339299-1347694 Glycine max
Glyma.05G014400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1339299-1341298 Glycine max
Glyma.05G014400 5.0kb upstream 5.0kb upstream 11396 true Chr05: 1341299-1352694 Glycine max
Glyma.05G014400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1347695-1352694 Glycine max
Glyma.05G014400 5.0kb downstream 5.0kb downstream 11396 true Chr05: 1336299-1347694 Glycine max
Glyma.05G014400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1336299-1341298 Glycine max
Glyma.05G014400 10.0kb upstream 10.0kb upstream 16396 true Chr05: 1341299-1357694 Glycine max
Glyma.05G014400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1347695-1357694 Glycine max
Glyma.05G014400 10.0kb downstream 10.0kb downstream 16396 true Chr05: 1331299-1347694 Glycine max
Glyma.05G014400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1331299-1341298 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305599 5265 Fabidae View MSA
124062210 5270 Rosid View MSA
123740172 5271 Pentapetalae View MSA
122787275 5272 Eudicot View MSA
122048012 5273 Angiosperm View MSA
121349794 5274 Embryophyte View MSA
123428489 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.83335 0.0 17.0528    
cufflinks 4.71175 0.0 18.3836    
cufflinks 3.78284 0.0 15.4829    
cufflinks 3.75345 0.0 15.0157    
cufflinks 4.77637 0.0 18.1269    
cufflinks 3.4094 0.0 12.0077   Low
cufflinks 3.20292 0.0 13.6984   Low
cufflinks 4.97211 0.0 19.1116   High
cufflinks 4.61648 0.0 17.4728    
cufflinks 0.949        
cufflinks 0.487       Low
cufflinks 0.976        
cufflinks 1.456       High
cufflinks 1.793       High
cufflinks 0.481       Low
cufflinks 1.107        
cufflinks 0.54       Low
cufflinks 1.067        
cufflinks 1.153        
cufflinks 1.175        
cufflinks 0.457       Low
cufflinks 1.131        
cufflinks 0.987        
cufflinks 0.708        
cufflinks 1.17        
cufflinks 0.533       Low

0 Strain