Gene : Glyma.05G015200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13384:SF19 - G PATCH DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  152
Name:  ? Glyma.05G015200 Secondary Identifier:  ? PAC:30526627
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G015200 0.5kb upstream 0.5kb upstream 12353 true Chr05: 1386165-1398517 Glycine max
Glyma.05G015200 0.5kb upstream 0.5kb upstream 500 false Chr05: 1386165-1386664 Glycine max
Glyma.05G015200 0.5kb downstream 0.5kb downstream 12353 true Chr05: 1386665-1399017 Glycine max
Glyma.05G015200 0.5kb downstream 0.5kb downstream 500 false Chr05: 1398518-1399017 Glycine max
Glyma.05G015200 1.0kb upstream 1.0kb upstream 12853 true Chr05: 1385665-1398517 Glycine max
Glyma.05G015200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1385665-1386664 Glycine max
Glyma.05G015200 1.0kb downstream 1.0kb downstream 12853 true Chr05: 1386665-1399517 Glycine max
Glyma.05G015200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1398518-1399517 Glycine max
Glyma.05G015200 2.0kb upstream 2.0kb upstream 13853 true Chr05: 1384665-1398517 Glycine max
Glyma.05G015200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1384665-1386664 Glycine max
Glyma.05G015200 2.0kb downstream 2.0kb downstream 13853 true Chr05: 1386665-1400517 Glycine max
Glyma.05G015200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1398518-1400517 Glycine max
Glyma.05G015200 5.0kb upstream 5.0kb upstream 16853 true Chr05: 1381665-1398517 Glycine max
Glyma.05G015200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1381665-1386664 Glycine max
Glyma.05G015200 5.0kb downstream 5.0kb downstream 16853 true Chr05: 1386665-1403517 Glycine max
Glyma.05G015200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1398518-1403517 Glycine max
Glyma.05G015200 10.0kb upstream 10.0kb upstream 21853 true Chr05: 1376665-1398517 Glycine max
Glyma.05G015200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1376665-1386664 Glycine max
Glyma.05G015200 10.0kb downstream 10.0kb downstream 21853 true Chr05: 1386665-1408517 Glycine max
Glyma.05G015200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1398518-1408517 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305648 5265 Fabidae View MSA
124067571 5270 Rosid View MSA
123746578 5271 Pentapetalae View MSA
122793732 5272 Eudicot View MSA
122044115 5273 Angiosperm View MSA
121345398 5274 Embryophyte View MSA
123424133 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.79108 0.0 26.2554   High
cufflinks 7.59708 0.0 20.2715    
cufflinks 8.30464 0.0 22.1937    
cufflinks 6.40663 0.0 17.0994    
cufflinks 5.74633 0.0 15.3707    
cufflinks 4.63752 0.0 12.4919   Low
cufflinks 7.85828 0.0 20.9713    
cufflinks 6.08155 0.0 16.2436    
cufflinks 7.49189 0.0 19.9894    
cufflinks 2.281        
cufflinks 1.45       Low
cufflinks 4.627        
cufflinks 2.351        
cufflinks 2.325        
cufflinks 2.971        
cufflinks 4.008        
cufflinks 1.629       Low
cufflinks 5.095       High
cufflinks 3.64        
cufflinks 5.479       High
cufflinks 1.633       Low
cufflinks 5.378       High
cufflinks 3.941        
cufflinks 1.668       Low
cufflinks 4.828       High
cufflinks 1.892        

0 Strain