Gene : Glyma.05G016000 G. max Wm82.a2.v1
Defline:  (1 of 30) PF00581 - Rhodanese-like domain (Rhodanese) Genomic Order:  160
Name:  ? Glyma.05G016000 Secondary Identifier:  ? PAC:30524343
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G016000 0.5kb upstream 0.5kb upstream 3564 true Chr05: 1447302-1450865 Glycine max
Glyma.05G016000 0.5kb upstream 0.5kb upstream 500 false Chr05: 1447302-1447801 Glycine max
Glyma.05G016000 0.5kb downstream 0.5kb downstream 3564 true Chr05: 1447802-1451365 Glycine max
Glyma.05G016000 0.5kb downstream 0.5kb downstream 500 false Chr05: 1450866-1451365 Glycine max
Glyma.05G016000 1.0kb upstream 1.0kb upstream 4064 true Chr05: 1446802-1450865 Glycine max
Glyma.05G016000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1446802-1447801 Glycine max
Glyma.05G016000 1.0kb downstream 1.0kb downstream 4064 true Chr05: 1447802-1451865 Glycine max
Glyma.05G016000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1450866-1451865 Glycine max
Glyma.05G016000 2.0kb upstream 2.0kb upstream 5064 true Chr05: 1445802-1450865 Glycine max
Glyma.05G016000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1445802-1447801 Glycine max
Glyma.05G016000 2.0kb downstream 2.0kb downstream 5064 true Chr05: 1447802-1452865 Glycine max
Glyma.05G016000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1450866-1452865 Glycine max
Glyma.05G016000 5.0kb upstream 5.0kb upstream 8064 true Chr05: 1442802-1450865 Glycine max
Glyma.05G016000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1442802-1447801 Glycine max
Glyma.05G016000 5.0kb downstream 5.0kb downstream 8064 true Chr05: 1447802-1455865 Glycine max
Glyma.05G016000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1450866-1455865 Glycine max
Glyma.05G016000 10.0kb upstream 10.0kb upstream 13064 true Chr05: 1437802-1450865 Glycine max
Glyma.05G016000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1437802-1447801 Glycine max
Glyma.05G016000 10.0kb downstream 10.0kb downstream 13064 true Chr05: 1447802-1460865 Glycine max
Glyma.05G016000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1450866-1460865 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041508 5273 Angiosperm View MSA
122304765 5265 Fabidae View MSA
124067334 5270 Rosid View MSA
123738970 5271 Pentapetalae View MSA
122793267 5272 Eudicot View MSA
121347966 5274 Embryophyte View MSA
123427649 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.3918 0.0 131.537 High High
cufflinks 13.6715 0.0 47.4404   High
cufflinks 1.79763 0.0 9.30826    
cufflinks 3.97489 0.0 15.4301    
cufflinks 1.60851 0.0 8.19477    
cufflinks 1.3904 0.0 7.34863    
cufflinks 0.965991 0.0 5.73695    
cufflinks 3.39103 0.0 13.6689    
cufflinks 0.356203 0.0 2.31426   Low
cufflinks 2.375        
cufflinks 0.025     Low Low
cufflinks 1.409        
cufflinks 0.189        
cufflinks 0.164        
cufflinks 0.006     Low Low
cufflinks 10.35     High High
cufflinks 0.044     Low  
cufflinks 3.183        
cufflinks 5.515        
cufflinks 7.775     High  
cufflinks 0.025     Low Low
cufflinks 9.261     High High
cufflinks 10.307     High High
cufflinks 0.009     Low Low
cufflinks 10.256     High High
cufflinks 0.023     Low Low

0 Strain