Gene : Glyma.05G016100 G. max Wm82.a2.v1
Defline:  (1 of 7) PF11833 - Protein of unknown function (DUF3353) (DUF3353) Genomic Order:  161
Name:  ? Glyma.05G016100 Secondary Identifier:  ? PAC:30524779
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G016100 0.5kb upstream 0.5kb upstream 4215 true Chr05: 1451670-1455884 Glycine max
Glyma.05G016100 0.5kb upstream 0.5kb upstream 500 false Chr05: 1451670-1452169 Glycine max
Glyma.05G016100 0.5kb downstream 0.5kb downstream 4215 true Chr05: 1452170-1456384 Glycine max
Glyma.05G016100 0.5kb downstream 0.5kb downstream 500 false Chr05: 1455885-1456384 Glycine max
Glyma.05G016100 1.0kb upstream 1.0kb upstream 4715 true Chr05: 1451170-1455884 Glycine max
Glyma.05G016100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1451170-1452169 Glycine max
Glyma.05G016100 1.0kb downstream 1.0kb downstream 4715 true Chr05: 1452170-1456884 Glycine max
Glyma.05G016100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1455885-1456884 Glycine max
Glyma.05G016100 2.0kb upstream 2.0kb upstream 5715 true Chr05: 1450170-1455884 Glycine max
Glyma.05G016100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1450170-1452169 Glycine max
Glyma.05G016100 2.0kb downstream 2.0kb downstream 5715 true Chr05: 1452170-1457884 Glycine max
Glyma.05G016100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1455885-1457884 Glycine max
Glyma.05G016100 5.0kb upstream 5.0kb upstream 8715 true Chr05: 1447170-1455884 Glycine max
Glyma.05G016100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1447170-1452169 Glycine max
Glyma.05G016100 5.0kb downstream 5.0kb downstream 8715 true Chr05: 1452170-1460884 Glycine max
Glyma.05G016100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1455885-1460884 Glycine max
Glyma.05G016100 10.0kb upstream 10.0kb upstream 13715 true Chr05: 1442170-1455884 Glycine max
Glyma.05G016100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1442170-1452169 Glycine max
Glyma.05G016100 10.0kb downstream 10.0kb downstream 13715 true Chr05: 1452170-1465884 Glycine max
Glyma.05G016100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1455885-1465884 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308193 5265 Fabidae View MSA
124060931 5270 Rosid View MSA
123736448 5271 Pentapetalae View MSA
122790363 5272 Eudicot View MSA
122050900 5273 Angiosperm View MSA
121343809 5274 Embryophyte View MSA
123427732 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.93 0.0 142.574 High High
cufflinks 29.4897 0.0 107.416 High  
cufflinks 19.777 0.0 72.2163    
cufflinks 20.9814 0.0 77.4496 High  
cufflinks 19.3331 0.0 70.7376    
cufflinks 17.3477 0.0 63.3808   Low
cufflinks 38.7641 0.0 144.045 High High
cufflinks 21.7927 0.0 83.3283 High  
cufflinks 19.4493 0.0 71.2851    
cufflinks 3.554        
cufflinks 2.486        
cufflinks 3.517        
cufflinks 2.441        
cufflinks 2.666        
cufflinks 2.003       Low
cufflinks 5.654       High
cufflinks 2.28       Low
cufflinks 3.891        
cufflinks 4.937        
cufflinks 6.345       High
cufflinks 2.228       Low
cufflinks 6.23       High
cufflinks 7.355       High
cufflinks 2.977        
cufflinks 5.721       High
cufflinks 2.256       Low

0 Strain