Gene : Glyma.05G016200 G. max Wm82.a2.v1
Defline:  (1 of 30) PF00335 - Tetraspanin family (Tetraspannin) Genomic Order:  162
Name:  ? Glyma.05G016200 Secondary Identifier:  ? PAC:30524303
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G016200 0.5kb upstream 0.5kb upstream 2302 true Chr05: 1456776-1459077 Glycine max
Glyma.05G016200 0.5kb upstream 0.5kb upstream 500 false Chr05: 1458578-1459077 Glycine max
Glyma.05G016200 0.5kb downstream 0.5kb downstream 2302 true Chr05: 1456276-1458577 Glycine max
Glyma.05G016200 0.5kb downstream 0.5kb downstream 500 false Chr05: 1456276-1456775 Glycine max
Glyma.05G016200 1.0kb upstream 1.0kb upstream 2802 true Chr05: 1456776-1459577 Glycine max
Glyma.05G016200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1458578-1459577 Glycine max
Glyma.05G016200 1.0kb downstream 1.0kb downstream 2802 true Chr05: 1455776-1458577 Glycine max
Glyma.05G016200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1455776-1456775 Glycine max
Glyma.05G016200 2.0kb upstream 2.0kb upstream 3802 true Chr05: 1456776-1460577 Glycine max
Glyma.05G016200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1458578-1460577 Glycine max
Glyma.05G016200 2.0kb downstream 2.0kb downstream 3802 true Chr05: 1454776-1458577 Glycine max
Glyma.05G016200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1454776-1456775 Glycine max
Glyma.05G016200 5.0kb upstream 5.0kb upstream 6802 true Chr05: 1456776-1463577 Glycine max
Glyma.05G016200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1458578-1463577 Glycine max
Glyma.05G016200 5.0kb downstream 5.0kb downstream 6802 true Chr05: 1451776-1458577 Glycine max
Glyma.05G016200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1451776-1456775 Glycine max
Glyma.05G016200 10.0kb upstream 10.0kb upstream 11802 true Chr05: 1456776-1468577 Glycine max
Glyma.05G016200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1458578-1468577 Glycine max
Glyma.05G016200 10.0kb downstream 10.0kb downstream 11802 true Chr05: 1446776-1458577 Glycine max
Glyma.05G016200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1446776-1456775 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791931 5273 Angiosperm View MSA
122305021 5265 Fabidae View MSA
124050628 5270 Rosid View MSA
123747600 5271 Pentapetalae View MSA
122795388 5272 Eudicot View MSA
121063199 5274 Embryophyte View MSA
123102968 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.35636 0.0 1.38006    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0193588 0.0 0.0886675 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.091     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.354        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain