Gene : Glyma.05G016600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR23105//PTHR23105:SF61 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER Genomic Order:  166
Name:  ? Glyma.05G016600 Secondary Identifier:  ? PAC:30526363
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G016600 0.5kb upstream 0.5kb upstream 2540 true Chr05: 1477195-1479734 Glycine max
Glyma.05G016600 0.5kb upstream 0.5kb upstream 500 false Chr05: 1479235-1479734 Glycine max
Glyma.05G016600 0.5kb downstream 0.5kb downstream 2540 true Chr05: 1476695-1479234 Glycine max
Glyma.05G016600 0.5kb downstream 0.5kb downstream 500 false Chr05: 1476695-1477194 Glycine max
Glyma.05G016600 1.0kb upstream 1.0kb upstream 3040 true Chr05: 1477195-1480234 Glycine max
Glyma.05G016600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1479235-1480234 Glycine max
Glyma.05G016600 1.0kb downstream 1.0kb downstream 3040 true Chr05: 1476195-1479234 Glycine max
Glyma.05G016600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1476195-1477194 Glycine max
Glyma.05G016600 2.0kb upstream 2.0kb upstream 4040 true Chr05: 1477195-1481234 Glycine max
Glyma.05G016600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1479235-1481234 Glycine max
Glyma.05G016600 2.0kb downstream 2.0kb downstream 4040 true Chr05: 1475195-1479234 Glycine max
Glyma.05G016600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1475195-1477194 Glycine max
Glyma.05G016600 5.0kb upstream 5.0kb upstream 7040 true Chr05: 1477195-1484234 Glycine max
Glyma.05G016600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1479235-1484234 Glycine max
Glyma.05G016600 5.0kb downstream 5.0kb downstream 7040 true Chr05: 1472195-1479234 Glycine max
Glyma.05G016600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1472195-1477194 Glycine max
Glyma.05G016600 10.0kb upstream 10.0kb upstream 12040 true Chr05: 1477195-1489234 Glycine max
Glyma.05G016600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1479235-1489234 Glycine max
Glyma.05G016600 10.0kb downstream 10.0kb downstream 12040 true Chr05: 1467195-1479234 Glycine max
Glyma.05G016600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1467195-1477194 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040888 5273 Angiosperm View MSA
122250075 5265 Fabidae View MSA
123993393 5270 Rosid View MSA
123568177 5271 Pentapetalae View MSA
122602924 5272 Eudicot View MSA
121345742 5274 Embryophyte View MSA
123425979 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.3196 0.0 26.7864    
cufflinks 12.1407 0.0 33.9194    
cufflinks 3.31118 0.0 10.91   Low
cufflinks 7.72898 0.0 22.6765    
cufflinks 16.0957 0.0 43.9201   High
cufflinks 16.5755 0.0 45.149   High
cufflinks 10.018 0.0 28.5522    
cufflinks 9.34093 0.0 26.8247    
cufflinks 11.9606 0.0 33.4298    
cufflinks 1.4        
cufflinks 0.744       Low
cufflinks 2.14        
cufflinks 8.712     High High
cufflinks 13.969     High High
cufflinks 0.789       Low
cufflinks 2.376        
cufflinks 1.358        
cufflinks 2.049        
cufflinks 3.061        
cufflinks 1.605        
cufflinks 0.726       Low
cufflinks 1.752        
cufflinks 2.807        
cufflinks 0.672       Low
cufflinks 2.237        
cufflinks 1.195        

0 Strain