Gene : Glyma.05G010800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22595//PTHR22595:SF47 - CHITINASE-RELATED Genomic Order:  108
Name:  ? Glyma.05G010800 Secondary Identifier:  ? PAC:30525458
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G010800 0.5kb upstream 0.5kb upstream 1857 true Chr05: 945866-947722 Glycine max
Glyma.05G010800 0.5kb upstream 0.5kb upstream 500 false Chr05: 947223-947722 Glycine max
Glyma.05G010800 0.5kb downstream 0.5kb downstream 1857 true Chr05: 945366-947222 Glycine max
Glyma.05G010800 0.5kb downstream 0.5kb downstream 500 false Chr05: 945366-945865 Glycine max
Glyma.05G010800 1.0kb upstream 1.0kb upstream 2357 true Chr05: 945866-948222 Glycine max
Glyma.05G010800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 947223-948222 Glycine max
Glyma.05G010800 1.0kb downstream 1.0kb downstream 2357 true Chr05: 944866-947222 Glycine max
Glyma.05G010800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 944866-945865 Glycine max
Glyma.05G010800 2.0kb upstream 2.0kb upstream 3357 true Chr05: 945866-949222 Glycine max
Glyma.05G010800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 947223-949222 Glycine max
Glyma.05G010800 2.0kb downstream 2.0kb downstream 3357 true Chr05: 943866-947222 Glycine max
Glyma.05G010800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 943866-945865 Glycine max
Glyma.05G010800 5.0kb upstream 5.0kb upstream 6357 true Chr05: 945866-952222 Glycine max
Glyma.05G010800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 947223-952222 Glycine max
Glyma.05G010800 5.0kb downstream 5.0kb downstream 6357 true Chr05: 940866-947222 Glycine max
Glyma.05G010800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 940866-945865 Glycine max
Glyma.05G010800 10.0kb upstream 10.0kb upstream 11357 true Chr05: 945866-957222 Glycine max
Glyma.05G010800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 947223-957222 Glycine max
Glyma.05G010800 10.0kb downstream 10.0kb downstream 11357 true Chr05: 935866-947222 Glycine max
Glyma.05G010800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 935866-945865 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303828 5265 Fabidae View MSA
124070009 5270 Rosid View MSA
123742328 5271 Pentapetalae View MSA
122795225 5272 Eudicot View MSA
122051117 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.73714 0.0 12.3994    
cufflinks 5.70083 0.0 17.87    
cufflinks 4.17513 0.0 13.6649    
cufflinks 2.98583 0.0 10.1948    
cufflinks 3.38073 0.0 11.3516    
cufflinks 112.591 0.0 323.23 High High
cufflinks 2.22994 0.0 7.82089    
cufflinks 7.9547 0.0 23.8188    
cufflinks 2.41499 0.0 8.40298    
cufflinks 7.775     High High
cufflinks 2.754        
cufflinks 2.292        
cufflinks 3.123        
cufflinks 0.791       Low
cufflinks 1.849        
cufflinks 2.124        
cufflinks 11.7     High High
cufflinks 1.813        
cufflinks 3.831        
cufflinks 0.957       Low
cufflinks 3.21        
cufflinks 2.181        
cufflinks 3.425        
cufflinks 2.615        
cufflinks 1.404        
cufflinks 4.464        

0 Strain