Gene : Glyma.05G011500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31003//PTHR31003:SF3 - MYB FAMILY TRANSCRIPTION FACTOR Genomic Order:  115
Name:  ? Glyma.05G011500 Secondary Identifier:  ? PAC:30523606
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G011500 0.5kb upstream 0.5kb upstream 3633 true Chr05: 1019997-1023629 Glycine max
Glyma.05G011500 0.5kb upstream 0.5kb upstream 500 false Chr05: 1023130-1023629 Glycine max
Glyma.05G011500 0.5kb downstream 0.5kb downstream 3633 true Chr05: 1019497-1023129 Glycine max
Glyma.05G011500 0.5kb downstream 0.5kb downstream 500 false Chr05: 1019497-1019996 Glycine max
Glyma.05G011500 1.0kb upstream 1.0kb upstream 4133 true Chr05: 1019997-1024129 Glycine max
Glyma.05G011500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1023130-1024129 Glycine max
Glyma.05G011500 1.0kb downstream 1.0kb downstream 4133 true Chr05: 1018997-1023129 Glycine max
Glyma.05G011500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1018997-1019996 Glycine max
Glyma.05G011500 2.0kb upstream 2.0kb upstream 5133 true Chr05: 1019997-1025129 Glycine max
Glyma.05G011500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1023130-1025129 Glycine max
Glyma.05G011500 2.0kb downstream 2.0kb downstream 5133 true Chr05: 1017997-1023129 Glycine max
Glyma.05G011500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1017997-1019996 Glycine max
Glyma.05G011500 5.0kb upstream 5.0kb upstream 8133 true Chr05: 1019997-1028129 Glycine max
Glyma.05G011500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1023130-1028129 Glycine max
Glyma.05G011500 5.0kb downstream 5.0kb downstream 8133 true Chr05: 1014997-1023129 Glycine max
Glyma.05G011500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1014997-1019996 Glycine max
Glyma.05G011500 10.0kb upstream 10.0kb upstream 13133 true Chr05: 1019997-1033129 Glycine max
Glyma.05G011500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1023130-1033129 Glycine max
Glyma.05G011500 10.0kb downstream 10.0kb downstream 13133 true Chr05: 1009997-1023129 Glycine max
Glyma.05G011500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1009997-1019996 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303225 5265 Fabidae View MSA
124069300 5270 Rosid View MSA
123741348 5271 Pentapetalae View MSA
122789527 5272 Eudicot View MSA
122049766 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.30375 0.0 7.17797    
cufflinks 1.55947 0.0 5.14272    
cufflinks 2.40799 0.0 7.48379    
cufflinks 1.01144 0.0 3.49836    
cufflinks 1.04275 0.0 3.59125    
cufflinks 0.252982 0.0 0.954948 Low Low
cufflinks 0.441331 0.0 1.61784   Low
cufflinks 2.37071 0.0 7.33924    
cufflinks 1.0222 0.0 3.53455    
cufflinks 2.438       High
cufflinks 1.476        
cufflinks 2.623       High
cufflinks 1.214        
cufflinks 0.765        
cufflinks 0.291       Low
cufflinks 1.0        
cufflinks 0.53       Low
cufflinks 3.087       High
cufflinks 0.549       Low
cufflinks 1.476        
cufflinks 2.513       High
cufflinks 1.439        
cufflinks 1.575        
cufflinks 1.197        
cufflinks 1.247        
cufflinks 1.536        

0 Strain