Gene : Glyma.05G035300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22939//PTHR22939:SF85 - SERINE PROTEASE FAMILY S1C HTRA-RELATED Genomic Order:  353
Name:  ? Glyma.05G035300 Secondary Identifier:  ? PAC:30527399
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G035300 0.5kb upstream 0.5kb upstream 5957 true Chr05: 3112555-3118511 Glycine max
Glyma.05G035300 0.5kb upstream 0.5kb upstream 500 false Chr05: 3112555-3113054 Glycine max
Glyma.05G035300 0.5kb downstream 0.5kb downstream 5957 true Chr05: 3113055-3119011 Glycine max
Glyma.05G035300 0.5kb downstream 0.5kb downstream 500 false Chr05: 3118512-3119011 Glycine max
Glyma.05G035300 1.0kb upstream 1.0kb upstream 6457 true Chr05: 3112055-3118511 Glycine max
Glyma.05G035300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3112055-3113054 Glycine max
Glyma.05G035300 1.0kb downstream 1.0kb downstream 6457 true Chr05: 3113055-3119511 Glycine max
Glyma.05G035300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3118512-3119511 Glycine max
Glyma.05G035300 2.0kb upstream 2.0kb upstream 7457 true Chr05: 3111055-3118511 Glycine max
Glyma.05G035300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3111055-3113054 Glycine max
Glyma.05G035300 2.0kb downstream 2.0kb downstream 7457 true Chr05: 3113055-3120511 Glycine max
Glyma.05G035300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3118512-3120511 Glycine max
Glyma.05G035300 5.0kb upstream 5.0kb upstream 10457 true Chr05: 3108055-3118511 Glycine max
Glyma.05G035300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3108055-3113054 Glycine max
Glyma.05G035300 5.0kb downstream 5.0kb downstream 10457 true Chr05: 3113055-3123511 Glycine max
Glyma.05G035300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3118512-3123511 Glycine max
Glyma.05G035300 10.0kb upstream 10.0kb upstream 15457 true Chr05: 3103055-3118511 Glycine max
Glyma.05G035300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3103055-3113054 Glycine max
Glyma.05G035300 10.0kb downstream 10.0kb downstream 15457 true Chr05: 3113055-3128511 Glycine max
Glyma.05G035300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3118512-3128511 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310329 5265 Fabidae View MSA
124072965 5270 Rosid View MSA
123741119 5271 Pentapetalae View MSA
122794115 5272 Eudicot View MSA
122046723 5273 Angiosperm View MSA
121346662 5274 Embryophyte View MSA
123426440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.24545 0.0 28.0191   High
cufflinks 6.59194 0.0 21.1304    
cufflinks 6.49272 0.0 20.8707    
cufflinks 6.42856 0.0 20.6627    
cufflinks 8.28094 0.0 25.3566   High
cufflinks 4.53571 0.0 15.4953   Low
cufflinks 6.77251 0.0 21.3534    
cufflinks 5.60848 0.0 18.3633    
cufflinks 7.35898 0.0 23.0026    
cufflinks 1.847       Low
cufflinks 1.74       Low
cufflinks 2.726        
cufflinks 3.54       High
cufflinks 3.94       High
cufflinks 1.906       Low
cufflinks 2.657        
cufflinks 2.477        
cufflinks 2.526        
cufflinks 3.357       High
cufflinks 2.441        
cufflinks 1.942       Low
cufflinks 2.673        
cufflinks 3.4       High
cufflinks 2.521        
cufflinks 2.237        
cufflinks 2.67        

0 Strain